Cucsa.069370 (Cucumis sativus)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 Cucsa.069370 T24709_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.069370.1 PUF 137 171
Cucsa.069370.1 PUF 173 203
Cucsa.069370.1 PUF 209 243
Cucsa.069370.2 PUF 137 171
Cucsa.069370.2 PUF 173 203
Cucsa.069370.3 PUF 137 171
Cucsa.069370.3 PUF 173 203
Cucsa.069370.3 PUF 209 243

Links

Other PUF family RBPs
Other Cucumis sativus RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29726.m004103 Ricinus communis 29726.m004103 N 0.829
ppa002599m Prunus persica ppa002599m N 0.821
Glyma17g03290.1 Glycine max Glyma17g03290.1 N 0.821
B9N014_POPTR Populus trichocarpa POPTR_0008s23200 N 0.786
B9HXE2_POPTR Populus trichocarpa POPTR_0010s00780 N 0.771
XM_002885119.1 Arabidopsis lyrata Al_scaffold_0003_1757 N 0.712
Al_scaffold_0769_1 Arabidopsis lyrata Al_scaffold_0769_1 N 0.701