RBM5 (Tupaia belangeri)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSTBEG00000005424 T25663_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM5
M145_0.6 		Homo sapiens SAAGGRG RNAcompete
Ray et al.(2013)
RNCMPT00154 		0.905
RBM5
M053_0.6 		Homo sapiens GARGGWR RNAcompete
Ray et al.(2013)
RNCMPT00055 		0.905
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTBEP00000004717 RRM 100 172
ENSTBEP00000004717 RanBP ZF 179 207
ENSTBEP00000004717 RRM 230 305

Links

Other RanBP ZF,RRM family RBPs
Other Tupaia belangeri RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A0JMV4 Xenopus laevis A0JMV4 I 0.765
AAH77408 Xenopus laevis AAH77408 I 0.765
AAI26020 Xenopus laevis AAI26020 I 0.765
Ame_R008692 Ailuropoda melanoleuca Ame_R008692 I 0.905
RBM5 Anolis carolinensis ENSACAG00000008580 I 0.849
RBM5_BOVIN Bos taurus ENSBTAG00000006330 I 0.905
RBM5 Canis familiaris ENSCAFG00000010866 I 0.905
RBM5 Choloepus hoffmanni ENSCHOG00000009429 I 0.832
A6MKZ6_CALJA Callithrix jacchus ENSCJAG00000004740 I 0.905
RBM5 Cavia porcellus ENSCPOG00000008151 I 0.905
Rbm5 Dipodomys ordii ENSDORG00000007692 I 0.905
LOC100052535 Equus caballus ENSECAG00000020447 I 0.905
RBM5 Erinaceus europaeus ENSEEUG00000005943 I 0.899
RBM5 Echinops telfairi ENSETEG00000012773 I 0.866
RBM5 Felis catus ENSFCAG00000014639 N 0.819
RBM5 Homo sapiens ENSG00000003756 D 0.905
RBM5 Gallus gallus ENSGALG00000004626 I 0.872
RBM5 Gorilla gorilla ENSGGOG00000014490 I 0.810
RBM5 Loxodonta africana ENSLAFG00000006733 I 0.905
RBM5 Macropus eugenii ENSMEUG00000012994 N 0.859
RBM5 Meleagris gallopavo ENSMGAG00000003972 I 0.879
RBM5 Microcebus murinus ENSMICG00000016179 N 0.893
RBM5 Myotis lucifugus ENSMLUG00000007875 I 0.899
RBM5 Macaca mulatta ENSMMUG00000004921 I 0.905
RBM5 Monodelphis domestica ENSMODG00000012301 I 0.899
Rbm5 Mus musculus ENSMUSG00000032580 I 0.905
RBM5 Ornithorhynchus anatinus ENSOANG00000006557 I 0.899
RBM5 Oryctolagus cuniculus ENSOCUG00000011652 I 0.916
RBM5 Ochotona princeps ENSOPRG00000015154 I 0.721
RBM5 Procavia capensis ENSPCAG00000005459 I 0.738
RBM5 Pan troglodytes ENSPTRG00000014946 I 0.905
RBM5 Pteropus vampyrus ENSPVAG00000006812 I 0.899
Rbm5 Rattus norvegicus ENSRNOG00000018153 I 0.905
RBM5 Sorex araneus ENSSARG00000009724 I 0.732
RBM5 Sus scrofa ENSSSCG00000011395 I 0.905
RBM5 Spermophilus tridecemlineatus ENSSTOG00000013856 I 0.905
RBM5 Taeniopygia guttata ENSTGUG00000006417 I 0.879
RBM5 Tursiops truncatus ENSTTRG00000007717 I 0.899
RBM5 Vicugna pacos ENSVPAG00000009388 I 0.872
rbm5 Xenopus tropicalis ENSXETG00000007303 I 0.749
Q6DDU9 Xenopus laevis Q6DDU9 I 0.765