RBM5 (Sorex araneus)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSSARG00000009724 T25655_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM5
M145_0.6 		Homo sapiens SAAGGRG RNAcompete
Ray et al.(2013)
RNCMPT00154 		0.797
RBM5
M053_0.6 		Homo sapiens GARGGWR RNAcompete
Ray et al.(2013)
RNCMPT00055 		0.797
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000008791 RRM 94 131
ENSSARP00000008791 RanBP ZF 175 204
ENSSARP00000008791 RRM 227 296

Links

Other RanBP ZF,RRM family RBPs
Other Sorex araneus RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM5 Tarsius syrichta ENSTSYG00000004158 I 1.000
RBM5 Homo sapiens ENSG00000003756 D 0.797
LOC100052535 Equus caballus ENSECAG00000020447 I 0.797
RBM5 Sus scrofa ENSSSCG00000011395 I 0.797
RBM5 Cavia porcellus ENSCPOG00000008151 I 0.797
RBM5 Loxodonta africana ENSLAFG00000006733 I 0.797
RBM5 Macaca mulatta ENSMMUG00000004921 I 0.797
Rbm5 Rattus norvegicus ENSRNOG00000018153 I 0.797
RBM5 Pan troglodytes ENSPTRG00000014946 I 0.797
Rbm5 Mus musculus ENSMUSG00000032580 I 0.797
A6MKZ6_CALJA Callithrix jacchus ENSCJAG00000004740 I 0.797
Rbm5 Dipodomys ordii ENSDORG00000007692 I 0.797
Ame_R008692 Ailuropoda melanoleuca Ame_R008692 I 0.797
RBM5 Spermophilus tridecemlineatus ENSSTOG00000013856 I 0.797
RBM5_BOVIN Bos taurus ENSBTAG00000006330 I 0.797
RBM5 Canis familiaris ENSCAFG00000010866 I 0.797
RBM5 Ornithorhynchus anatinus ENSOANG00000006557 I 0.796
RBM5 Pteropus vampyrus ENSPVAG00000006812 I 0.791
RBM5 Erinaceus europaeus ENSEEUG00000005943 I 0.791
RBM5 Myotis lucifugus ENSMLUG00000007875 I 0.791
RBM5 Monodelphis domestica ENSMODG00000012301 I 0.773
RBM5 Macropus eugenii ENSMEUG00000012994 N 0.770
RBM5 Oryctolagus cuniculus ENSOCUG00000011652 I 0.763
RBM5 Vicugna pacos ENSVPAG00000009388 I 0.762
RBM5 Tursiops truncatus ENSTTRG00000007717 I 0.754
RBM5 Echinops telfairi ENSETEG00000012773 I 0.750
RBM5 Microcebus murinus ENSMICG00000016179 N 0.746
RBM5 Meleagris gallopavo ENSMGAG00000003972 I 0.741
RBM5 Taeniopygia guttata ENSTGUG00000006417 I 0.741
RBM5 Gallus gallus ENSGALG00000004626 I 0.736
RBM5 Tupaia belangeri ENSTBEG00000005424 I 0.732
RBM5 Choloepus hoffmanni ENSCHOG00000009429 I 0.709