RBM5 (Gallus gallus)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSGALG00000004626 T25571_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM5
M145_0.6 		Homo sapiens SAAGGRG RNAcompete
Ray et al.(2013)
RNCMPT00154 		0.925
RBM5
M053_0.6 		Homo sapiens GARGGWR RNAcompete
Ray et al.(2013)
RNCMPT00055 		0.925
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000007358 RRM 99 170
ENSGALP00000007358 RanBP ZF 180 209
ENSGALP00000007358 RRM 232 303

Links

Other RanBP ZF,RRM family RBPs
Other Gallus gallus RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM5 Taeniopygia guttata ENSTGUG00000006417 I 0.994
RBM5 Meleagris gallopavo ENSMGAG00000003972 I 0.994
RBM5 Anolis carolinensis ENSACAG00000008580 I 0.938
RBM5 Ornithorhynchus anatinus ENSOANG00000006557 I 0.931
RBM5 Monodelphis domestica ENSMODG00000012301 I 0.931
Rbm5 Rattus norvegicus ENSRNOG00000018153 I 0.925
A6MKZ6_CALJA Callithrix jacchus ENSCJAG00000004740 I 0.925
RBM5 Canis familiaris ENSCAFG00000010866 I 0.925
RBM5 Sus scrofa ENSSSCG00000011395 I 0.925
RBM5 Spermophilus tridecemlineatus ENSSTOG00000013856 I 0.925
RBM5_BOVIN Bos taurus ENSBTAG00000006330 I 0.925
RBM5 Pan troglodytes ENSPTRG00000014946 I 0.925
Rbm5 Dipodomys ordii ENSDORG00000007692 I 0.925
RBM5 Macaca mulatta ENSMMUG00000004921 I 0.925
RBM5 Homo sapiens ENSG00000003756 D 0.925
Rbm5 Mus musculus ENSMUSG00000032580 I 0.925
RBM5 Cavia porcellus ENSCPOG00000008151 I 0.925
Ame_R008692 Ailuropoda melanoleuca Ame_R008692 I 0.925
LOC100052535 Equus caballus ENSECAG00000020447 I 0.925
RBM5 Loxodonta africana ENSLAFG00000006733 I 0.925
RBM5 Erinaceus europaeus ENSEEUG00000005943 I 0.924
RBM5 Tursiops truncatus ENSTTRG00000007717 I 0.924
RBM5 Myotis lucifugus ENSMLUG00000007875 I 0.920
RBM5 Pteropus vampyrus ENSPVAG00000006812 I 0.920
RBM5 Microcebus murinus ENSMICG00000016179 N 0.917
RBM5 Oryctolagus cuniculus ENSOCUG00000011652 I 0.910
RBM5 Echinops telfairi ENSETEG00000012773 I 0.891
RBM5 Vicugna pacos ENSVPAG00000009388 I 0.891
RBM5 Tupaia belangeri ENSTBEG00000005424 I 0.872
RBM5 Macropus eugenii ENSMEUG00000012994 N 0.868
RBM5 Choloepus hoffmanni ENSCHOG00000009429 I 0.851
RBM5 Felis catus ENSFCAG00000014639 N 0.847
RBM5 Gorilla gorilla ENSGGOG00000014490 I 0.833
A0JMV4 Xenopus laevis A0JMV4 I 0.816
AAI26020 Xenopus laevis AAI26020 I 0.816
Q6DDU9 Xenopus laevis Q6DDU9 I 0.811
AAH77408 Xenopus laevis AAH77408 I 0.811
rbm5 Xenopus tropicalis ENSXETG00000007303 I 0.794
RBM5 Oryzias latipes ENSORLG00000003369 I 0.753
RBM5 Takifugu rubripes ENSTRUG00000008292 I 0.747
RBM5 Procavia capensis ENSPCAG00000005459 I 0.743
RBM5 Sorex araneus ENSSARG00000009724 I 0.736
RBM5 Ochotona princeps ENSOPRG00000015154 I 0.726
RBM5 Tetraodon nigroviridis ENSTNIG00000014742 I 0.722
RBM5 Gasterosteus aculeatus ENSGACG00000010469 I 0.718
RBM5 Gasterosteus aculeatus ENSGACG00000000858 I 0.713
RBM5 Tarsius syrichta ENSTSYG00000004158 I 0.701