BGIOSIBCE012723 (Oryza indica)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 BGIOSIBCE012723 T26199_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE012723 RanBP ZF 260 286
BGIOSIBCE012723 RanBP ZF 304 328
BGIOSIBCE012723 RanBP ZF 338 366

Links

Other RanBP ZF family RBPs
Other Oryza indica RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29673.m000937 Ricinus communis 29673.m000937 N 0.750
AT1G70650 Arabidopsis thaliana AT1G70650-TAIR-G N 0.716
BRADI1G11397 Brachypodium distachyon BRADI1G11397 N 0.951
cassava40376.m1 Manihot esculenta cassava40376.m1 N 0.741
XM_002887274.1 Arabidopsis lyrata fgenesh2_kg.2__1324__AT1G70650.1 N 0.728
Glyma02g09300.1 Glycine max Glyma02g09300.1 N 0.765
GRMZM2G090190 Zea mays GRMZM2G090190 N 0.951
GSVIVG00011669001 Vitis vinifera GSVIVG00011669001 N 0.759
LOC_Os03g50430 Oryza sativa LOC_Os03g50430 N 1.000
MDP0000132719 Malus x domestica MDP0000132719 N 0.735
MDP0000243554 Malus x domestica MDP0000243554 N 0.735
mgf021126m Mimulus guttatus mgf021126m N 0.714
PDK_20s1517711g001 Phoenix dactylifera PDK_20s1517711g001 N 0.824
PK11073.1 Cannabis sativa PK11073.1 N 0.738
B9HW23_POPTR Populus trichocarpa POPTR_0010s11770 N 0.729
ppa003582m Prunus persica ppa003582m N 0.765
SB01G010310 Sorghum bicolor Sb01g010310 N 0.951