MDP0000132719 (Malus x domestica)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 MDP0000132719 T27802_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000132719 RanBP ZF 148 172
MDP0000132719 RanBP ZF 192 218
MDP0000132719 RanBP ZF 226 253

Links

Other RanBP ZF family RBPs
Other Malus x domestica RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000243554 Malus x domestica MDP0000243554 N 1.000
ppa003582m Prunus persica ppa003582m N 0.893
GSVIVG00011669001 Vitis vinifera GSVIVG00011669001 N 0.840
Glyma02g09300.1 Glycine max Glyma02g09300.1 N 0.827
B9HW23_POPTR Populus trichocarpa POPTR_0010s11770 N 0.821
29673.m000937 Ricinus communis 29673.m000937 N 0.819
PK11073.1 Cannabis sativa PK11073.1 N 0.817
cassava40376.m1 Manihot esculenta cassava40376.m1 N 0.800
mgf021126m Mimulus guttatus mgf021126m N 0.793
Cucsa.012170 Cucumis sativus Cucsa.012170 N 0.738
GRMZM2G090190 Zea mays GRMZM2G090190 N 0.735
LOC_Os03g50430 Oryza sativa LOC_Os03g50430 N 0.735
SB01G010310 Sorghum bicolor Sb01g010310 N 0.735
BGIOSIBCE012723 Oryza indica BGIOSIBCE012723 N 0.735
AC233676_26 Medicago truncatula AC233676_26 N 0.732
XM_002887274.1 Arabidopsis lyrata fgenesh2_kg.2__1324__AT1G70650.1 N 0.728
PDK_20s1517711g001 Phoenix dactylifera PDK_20s1517711g001 N 0.724
BRADI1G11397 Brachypodium distachyon BRADI1G11397 N 0.723
AT1G70650 Arabidopsis thaliana AT1G70650-TAIR-G N 0.716