CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CpipJ_CPIJ008841
(
Culex pipiens
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CpipJ_CPIJ008841
T28940_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ008841-RA
RRM
8
78
VYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFENAEDAAAAVDNMNDSELCGRTVR
Links
Other
RRM
family RBPs
Other
Culex pipiens
RBPs
58 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
83285
Helobdella robusta
83285
N
0.000
PPIL4
Anolis carolinensis
ENSACAG00000006936
N
0.000
PPIL4
Gallus gallus
ENSGALG00000012364
N
0.000
PPIL4
Meleagris gallopavo
ENSMGAG00000012596
N
0.000
PPIL4
Taeniopygia guttata
ENSTGUG00000010655
N
0.000
estExt_Genewise1.C_180101
Capitella teleta
estExt_Genewise1.C_180101
N
0.000
e_gw.42.57.1
Nematostella vectensis
e_gw.42.57.1
N
0.000
LOAG_08216
Loa loa
LOAG_08216
N
0.000
PBANKA_142500
Plasmodium berghei
PBANKA_142500
N
0.000
PCHAS_142680
Plasmodium chabaudi
PCHAS_142680
N
0.000
PF08_0086
Plasmodium falciparum
PF08_0086
N
0.000
PVX_123145
Plasmodium vivax
PVX_123145
N
0.000
PY01794
Plasmodium yoelii
PY01794
N
0.000