CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
PVX_123145
(
Plasmodium vivax
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PVX_123145
T47549_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PVX_123145
RRM
223
293
LFVCKLNPVTEEEDLKTIFARFGPITSCNIVKDKVTNNSLQYAFIEFEKKEDCLNAYFEMDNVIIDDRRIH
Links
Other
RRM
family RBPs
Other
Plasmodium vivax
RBPs
48 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PKH_142610
Plasmodium knowlesi
PKH_142610
N
0.986
PY01794
Plasmodium yoelii
PY01794
N
0.944
PBANKA_142500
Plasmodium berghei
PBANKA_142500
N
0.944
PCHAS_142680
Plasmodium chabaudi
PCHAS_142680
N
0.930
PF08_0086
Plasmodium falciparum
PF08_0086
N
0.887
83285
Helobdella robusta
83285
N
0.746
PPIL4
Gallus gallus
ENSGALG00000012364
N
0.718
PPIL4
Taeniopygia guttata
ENSTGUG00000010655
N
0.718
PPIL4
Anolis carolinensis
ENSACAG00000006936
N
0.718
PPIL4
Meleagris gallopavo
ENSMGAG00000012596
N
0.718
e_gw.42.57.1
Nematostella vectensis
e_gw.42.57.1
N
0.718
estExt_Genewise1.C_180101
Capitella teleta
estExt_Genewise1.C_180101
N
0.718
PPIL4
Procavia capensis
ENSPCAG00000008203
N
0.704
PPIL4
Pan troglodytes
ENSPTRG00000018692
N
0.704
PPIL4
Pteropus vampyrus
ENSPVAG00000000746
N
0.704
PPIL4
Oryzias latipes
ENSORLG00000015310
N
0.704
PPIL4
Otolemur garnettii
ENSOGAG00000014153
N
0.704
PPIL4
Oryctolagus cuniculus
ENSOCUG00000007696
N
0.704
Ppil4
Rattus norvegicus
ENSRNOG00000015552
N
0.704
PPIL4
Ochotona princeps
ENSOPRG00000005619
N
0.704
TP03_0334
Theileria parva
TP03_0334
N
0.704
ppil4
Xenopus tropicalis
ENSXETG00000021385
N
0.704
Ame_R008665
Ailuropoda melanoleuca
Ame_R008665
N
0.704
Sjc_0091550
Schistosoma japonicum
Sjc_0091550
N
0.704
PPIL4
Vicugna pacos
ENSVPAG00000005157
N
0.704
PPIL4
Tursiops truncatus
ENSTTRG00000006014
N
0.704
ENSOANG00000001063
Ornithorhynchus anatinus
ENSOANG00000001063
N
0.704
PPIL4
Takifugu rubripes
ENSTRUG00000006670
N
0.704
PPIL4
Sorex araneus
ENSSARG00000011244
N
0.704
Ppil4
Mus musculus
ENSMUSG00000015757
N
0.704
PPIL4
Cavia porcellus
ENSCPOG00000014614
N
0.704
ppil4
Danio rerio
ENSDARG00000043854
N
0.704
PPIL4
Equus caballus
ENSECAG00000021819
N
0.704
Q6JDI1_CANFA
Canis familiaris
ENSCAFG00000000379
N
0.704
A6QP53_BOVIN
Bos taurus
ENSBTAG00000016980
N
0.704
CAOG_07850
Capsaspora owczarzaki
CAOG_07850
N
0.704
LOAG_08216
Loa loa
LOAG_08216
N
0.704
XP_782627.2
Strongylocentrotus purpuratus
XP_782627.2
N
0.704
PPIL4
Homo sapiens
ENSG00000131013
N
0.704
XP_001192414.1
Strongylocentrotus purpuratus
XP_001192414.1
N
0.704
PPIL4
Myotis lucifugus
ENSMLUG00000002766
N
0.704
PPIL4
Macaca mulatta
ENSMMUG00000023067
N
0.704
PPIL4
Monodelphis domestica
ENSMODG00000016825
N
0.704
PPIL4
Microcebus murinus
ENSMICG00000006287
N
0.704
XP_001180629.1
Strongylocentrotus purpuratus
XP_001180629.1
N
0.704
PPIL4
Gorilla gorilla
ENSGGOG00000009686
N
0.704
PPIL4
Loxodonta africana
ENSLAFG00000026804
N
0.704
XP_787384.2
Strongylocentrotus purpuratus
XP_787384.2
N
0.704