CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PY01794
(
Plasmodium yoelii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PY01794
T47576_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PY01794
RRM
205
275
LFVCKLNPITEEEDLKTIFLRFGPIISCNIVKDKVTNNSLQYAFIEFEKKEDCLNAYFEMDNVVIDDRRIH
Links
Other
RRM
family RBPs
Other
Plasmodium yoelii
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PBANKA_142500
Plasmodium berghei
PBANKA_142500
N
1.000
PCHAS_142680
Plasmodium chabaudi
PCHAS_142680
N
0.986
PVX_123145
Plasmodium vivax
PVX_123145
N
0.944
PKH_142610
Plasmodium knowlesi
PKH_142610
N
0.930
PF08_0086
Plasmodium falciparum
PF08_0086
N
0.887
83285
Helobdella robusta
83285
N
0.718
PPIL4
Meleagris gallopavo
ENSMGAG00000012596
N
0.704
PPIL4
Taeniopygia guttata
ENSTGUG00000010655
N
0.704
PPIL4
Gallus gallus
ENSGALG00000012364
N
0.704
PPIL4
Anolis carolinensis
ENSACAG00000006936
N
0.704
estExt_Genewise1.C_180101
Capitella teleta
estExt_Genewise1.C_180101
N
0.704
e_gw.42.57.1
Nematostella vectensis
e_gw.42.57.1
N
0.704
Sjc_0091550
Schistosoma japonicum
Sjc_0091550
N
0.704
XP_001180629.1
Strongylocentrotus purpuratus
XP_001180629.1
N
0.704
XP_782627.2
Strongylocentrotus purpuratus
XP_782627.2
N
0.704
XP_001192414.1
Strongylocentrotus purpuratus
XP_001192414.1
N
0.704
XP_787384.2
Strongylocentrotus purpuratus
XP_787384.2
N
0.704