CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UM04861
(
Ustilago maydis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
UM04861
T31306_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
UM04861
RRM
36
112
LYLGNLSFYTTEEQIYEVFGRVSSVSTGGGIKRIIMGLDRNTKTPCGFAFVEFYTHAEAVDCMRYVSGSKVDERVIR
Links
Other
RRM
family RBPs
Other
Ustilago maydis
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R015338
Ailuropoda melanoleuca
Ame_R015338
N
0.000
A7MB88_BOVIN
Bos taurus
ENSBTAG00000002854
N
0.000
TMEM63A
Callithrix jacchus
ENSCJAG00000012604
N
0.000
ENSCPOG00000021098
Cavia porcellus
ENSCPOG00000021098
N
0.000
LOC100057436
Equus caballus
ENSECAG00000018566
N
0.000
TMEM63A
Felis catus
ENSFCAG00000006966
N
0.000
TMEM63A
Homo sapiens
ENSG00000196187
N
0.000
TMEM63A
Gorilla gorilla
ENSGGOG00000000862
N
0.000
TMEM63A
Microcebus murinus
ENSMICG00000004058
N
0.000
Tmem63a
Mus musculus
ENSMUSG00000026519
N
0.000
TMEM63A
Oryctolagus cuniculus
ENSOCUG00000001907
N
0.000
TMEM63A
Otolemur garnettii
ENSOGAG00000010346
N
0.000
TMEM63A
Ochotona princeps
ENSOPRG00000012151
N
0.000
XR_022984.1
Pan troglodytes
ENSPTRG00000002040
N
0.000
Tmem6
Rattus norvegicus
ENSRNOG00000003310
N
0.000
TMEM63A
Sus scrofa
ENSSSCG00000010854
N
0.000
TMEM63A
Tursiops truncatus
ENSTTRG00000010132
N
0.000