CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
Tmem63a
(
Mus musculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMUSG00000026519
T39277_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000027800
RRM
229
262
LFITGLPREARKETVESHFRDAYPTCEVVDVQLC
ENSMUSP00000027800
RRM
335
377
TAEESRVQDQPLGMAFVTFREKSMATYILKDFNACKCQGLRCK
ENSMUSP00000124021
RRM
229
262
LFITGLPREARKETVESHFRDAYPTCEVVDVQLC
ENSMUSP00000124021
RRM
335
377
TAEESRVQDQPLGMAFVTFREKSMATYILKDFNACKCQGLRCK
Links
Other
RRM
family RBPs
Other
Mus musculus
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Tmem6
Rattus norvegicus
ENSRNOG00000003310
N
0.974
TMEM63A
Oryctolagus cuniculus
ENSOCUG00000001907
N
0.863
TMEM63A
Tursiops truncatus
ENSTTRG00000010132
N
0.850
TMEM63A
Homo sapiens
ENSG00000196187
N
0.850
TMEM63A
Sus scrofa
ENSSSCG00000010854
N
0.850
XR_022984.1
Pan troglodytes
ENSPTRG00000002040
N
0.850
TMEM63A
Gorilla gorilla
ENSGGOG00000000862
N
0.850
TMEM63A
Ochotona princeps
ENSOPRG00000012151
N
0.848
LOC100057436
Equus caballus
ENSECAG00000018566
N
0.840
TMEM63A
Myotis lucifugus
ENSMLUG00000016338
N
0.835
TMEM63A
Callithrix jacchus
ENSCJAG00000012604
N
0.827
TMEM63A
Felis catus
ENSFCAG00000006966
N
0.825
TMEM63A
Echinops telfairi
ENSETEG00000012297
N
0.817
A7MB88_BOVIN
Bos taurus
ENSBTAG00000002854
N
0.817
TMEM63A
Microcebus murinus
ENSMICG00000004058
N
0.807
TMEM63A
Otolemur garnettii
ENSOGAG00000010346
N
0.805
TMEM63A
Pteropus vampyrus
ENSPVAG00000004786
N
0.800
Ame_R015338
Ailuropoda melanoleuca
Ame_R015338
N
0.797
ENSCPOG00000024507
Cavia porcellus
ENSCPOG00000024507
N
0.769
TMEM63A
Macropus eugenii
ENSMEUG00000003227
N
0.762
Tmem63a
Dipodomys ordii
ENSDORG00000003334
N
0.762
TMEM63A
Loxodonta africana
ENSLAFG00000017739
N
0.756
TMEM63A
Dasypus novemcinctus
ENSDNOG00000024203
N
0.741
TMEM63A
Monodelphis domestica
ENSMODG00000005934
N
0.738
TMEM63A
Ornithorhynchus anatinus
ENSOANG00000001474
N
0.718