CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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nasonia_NCBI_hmm329034
(
Nasonia vitripennis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
nasonia_NCBI_hmm329034
T32214_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
nasonia_NCBI_hmm329034
RRM
107
161
IHIRNIPNEVSEGEIIHLGMPFGRVTNVLVLKGKNQAFLEMADEGSAATMVTYCA
nasonia_NCBI_hmm329034
RRM
229
295
VIVEHQIYPISLDVLYQIFTRYGKVLKIVTFTKNGTFQALIQYADMLSAQTAKFNLDGQNIYNSCCT
nasonia_NCBI_hmm329034
RRM
375
441
LLISNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQLAEPHQAHLAMTHMDKLKVFGKPIR
nasonia_NCBI_hmm329034
RRM
492
557
LHLSNIPATVSEEEIKEAFTKNGFTVKAFKFFPKDRKMALIQMPSMDDAVSALIKMHNYQLSESNH
Links
Other
RRM
family RBPs
Other
Nasonia vitripennis
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH54991
Xenopus laevis
AAH54991
N
0.000
Ame_R015252
Ailuropoda melanoleuca
Ame_R015252
N
0.000
RBM7
Anolis carolinensis
ENSACAG00000011589
N
0.000
RBM7_BOVIN
Bos taurus
ENSBTAG00000008219
N
0.000
RBM7
Canis familiaris
ENSCAFG00000013514
N
0.000
RBM7
Choloepus hoffmanni
ENSCHOG00000012747
N
0.000
LOC100403943
Callithrix jacchus
ENSCJAG00000011949
N
0.000
RBM7
Cavia porcellus
ENSCPOG00000005320
N
0.000
RBM11
Danio rerio
ENSDARG00000020841
N
0.000
RBM7
Dasypus novemcinctus
ENSDNOG00000018423
N
0.000
LOC100062305
Equus caballus
ENSECAG00000004636
N
0.000
RBM7
Erinaceus europaeus
ENSEEUG00000015854
N
0.000
RBM7
Echinops telfairi
ENSETEG00000015869
N
0.000
RBM7
Felis catus
ENSFCAG00000015443
N
0.000
RBM7
Homo sapiens
ENSG00000076053
N
0.000
Q5ZLE3_CHICK
Gallus gallus
ENSGALG00000007017
N
0.000
RBM7
Gorilla gorilla
ENSGGOG00000009941
N
0.000
RBM7
Loxodonta africana
ENSLAFG00000012444
N
0.000
RBM7
Macropus eugenii
ENSMEUG00000006187
N
0.000
RBM7
Microcebus murinus
ENSMICG00000010087
N
0.000
RBM7
Macaca mulatta
ENSMMUG00000012270
N
0.000
RBM7
Monodelphis domestica
ENSMODG00000013918
N
0.000
Rbm7
Mus musculus
ENSMUSG00000042396
N
0.000
RBM7
Ornithorhynchus anatinus
ENSOANG00000001755
N
0.000
RBM7
Oryctolagus cuniculus
ENSOCUG00000003342
N
0.000
RBM7
Ochotona princeps
ENSOPRG00000011060
N
0.000
ENSPPYG00000003894
Pongo pygmaeus
ENSPPYG00000003894
N
0.000
RBM7
Pan troglodytes
ENSPTRG00000004305
N
0.000
RBM7
Pteropus vampyrus
ENSPVAG00000005294
N
0.000
Rbm7
Rattus norvegicus
ENSRNOG00000005710
N
0.000
RBM7
Sus scrofa
ENSSSCG00000015057
N
0.000
RBM7
Spermophilus tridecemlineatus
ENSSTOG00000012459
N
0.000
RBM7
Tupaia belangeri
ENSTBEG00000008650
N
0.000
RBM7
Taeniopygia guttata
ENSTGUG00000000117
N
0.000
RBM7
Tarsius syrichta
ENSTSYG00000013731
N
0.000
RBM7
Tursiops truncatus
ENSTTRG00000001515
N
0.000
RBM7
Vicugna pacos
ENSVPAG00000006300
N
0.000
rbm7
Xenopus tropicalis
ENSXETG00000012654
N
0.000