CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM7
(
Cavia porcellus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCPOG00000005320
T35777_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000004784
RRM
25
82
RLLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLFGRPIK
Links
Other
RRM
family RBPs
Other
Cavia porcellus
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM7
Procavia capensis
ENSPCAG00000003270
N
0.845
RBM7
Spermophilus tridecemlineatus
ENSSTOG00000012459
N
0.821
RBM7
Microcebus murinus
ENSMICG00000010087
N
0.814
RBM7
Sus scrofa
ENSSSCG00000015057
N
0.814
RBM7
Oryctolagus cuniculus
ENSOCUG00000003342
N
0.814
RBM7
Dasypus novemcinctus
ENSDNOG00000018423
N
0.814
RBM7
Pteropus vampyrus
ENSPVAG00000005294
N
0.814
RBM7
Tupaia belangeri
ENSTBEG00000008650
N
0.814
RBM7
Choloepus hoffmanni
ENSCHOG00000012747
N
0.814
RBM7
Felis catus
ENSFCAG00000015443
N
0.814
RBM7_BOVIN
Bos taurus
ENSBTAG00000008219
N
0.814
RBM7
Vicugna pacos
ENSVPAG00000006300
N
0.814
RBM7
Tursiops truncatus
ENSTTRG00000001515
N
0.814
LOC100403943
Callithrix jacchus
ENSCJAG00000011949
N
0.800
RBM7
Canis familiaris
ENSCAFG00000013514
N
0.800
Rbm7
Rattus norvegicus
ENSRNOG00000005710
N
0.800
ENSPPYG00000003894
Pongo pygmaeus
ENSPPYG00000003894
N
0.800
RBM7
Tarsius syrichta
ENSTSYG00000013731
N
0.800
RBM7
Pan troglodytes
ENSPTRG00000004305
N
0.800
RBM7
Ochotona princeps
ENSOPRG00000011060
N
0.800
RBM7
Homo sapiens
ENSG00000076053
N
0.800
LOC100062305
Equus caballus
ENSECAG00000004636
N
0.800
RBM7
Loxodonta africana
ENSLAFG00000012444
N
0.800
RBM7
Gorilla gorilla
ENSGGOG00000009941
N
0.800
RBM7
Macaca mulatta
ENSMMUG00000012270
N
0.800
Rbm7
Mus musculus
ENSMUSG00000042396
N
0.800
RBM7
Erinaceus europaeus
ENSEEUG00000015854
N
0.786
Ame_R015252
Ailuropoda melanoleuca
Ame_R015252
N
0.786
RBM7
Monodelphis domestica
ENSMODG00000013918
N
0.786
RBM7
Macropus eugenii
ENSMEUG00000006187
N
0.786
RBM7
Echinops telfairi
ENSETEG00000015869
N
0.771
RBM7
Ornithorhynchus anatinus
ENSOANG00000001755
N
0.771
rbm7
Xenopus tropicalis
ENSXETG00000012654
N
0.714
Q5ZLE3_CHICK
Gallus gallus
ENSGALG00000007017
N
0.714
RBM7
Meleagris gallopavo
ENSMGAG00000003004
N
0.714
AAH54991
Xenopus laevis
AAH54991
N
0.700