CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM7
(
Spermophilus tridecemlineatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSTOG00000012459
T41641_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000011163
RRM
15
81
GNLETKVTEELLFKHFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLFGRPIK
Links
Other
RRM
family RBPs
Other
Spermophilus tridecemlineatus
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM7
Tupaia belangeri
ENSTBEG00000008650
N
0.929
RBM7
Dasypus novemcinctus
ENSDNOG00000018423
N
0.929
RBM7
Choloepus hoffmanni
ENSCHOG00000012747
N
0.929
RBM7
Microcebus murinus
ENSMICG00000010087
N
0.929
RBM7
Oryctolagus cuniculus
ENSOCUG00000003342
N
0.929
RBM7
Sus scrofa
ENSSSCG00000015057
N
0.929
RBM7
Pteropus vampyrus
ENSPVAG00000005294
N
0.929
RBM7_BOVIN
Bos taurus
ENSBTAG00000008219
N
0.929
RBM7
Felis catus
ENSFCAG00000015443
N
0.929
RBM7
Vicugna pacos
ENSVPAG00000006300
N
0.929
RBM7
Tursiops truncatus
ENSTTRG00000001515
N
0.929
ENSPPYG00000003894
Pongo pygmaeus
ENSPPYG00000003894
N
0.914
RBM7
Homo sapiens
ENSG00000076053
N
0.914
RBM7
Gorilla gorilla
ENSGGOG00000009941
N
0.914
RBM7
Ochotona princeps
ENSOPRG00000011060
N
0.914
Rbm7
Mus musculus
ENSMUSG00000042396
N
0.914
RBM7
Macaca mulatta
ENSMMUG00000012270
N
0.914
RBM7
Pan troglodytes
ENSPTRG00000004305
N
0.914
LOC100403943
Callithrix jacchus
ENSCJAG00000011949
N
0.914
Rbm7
Rattus norvegicus
ENSRNOG00000005710
N
0.914
LOC100062305
Equus caballus
ENSECAG00000004636
N
0.914
RBM7
Canis familiaris
ENSCAFG00000013514
N
0.914
RBM7
Tarsius syrichta
ENSTSYG00000013731
N
0.914
RBM7
Loxodonta africana
ENSLAFG00000012444
N
0.900
RBM7
Erinaceus europaeus
ENSEEUG00000015854
N
0.900
Ame_R015252
Ailuropoda melanoleuca
Ame_R015252
N
0.900
RBM7
Echinops telfairi
ENSETEG00000015869
N
0.886
RBM7
Ornithorhynchus anatinus
ENSOANG00000001755
N
0.871
RBM7
Macropus eugenii
ENSMEUG00000006187
N
0.871
RBM7
Monodelphis domestica
ENSMODG00000013918
N
0.871
RBM7
Cavia porcellus
ENSCPOG00000005320
N
0.821
Q5ZLE3_CHICK
Gallus gallus
ENSGALG00000007017
N
0.800
RBM7
Meleagris gallopavo
ENSMGAG00000003004
N
0.800
rbm7
Xenopus tropicalis
ENSXETG00000012654
N
0.771
AAH54991
Xenopus laevis
AAH54991
N
0.757
RBM7
Procavia capensis
ENSPCAG00000003270
N
0.731
RBM7
Taeniopygia guttata
ENSTGUG00000000117
N
0.729
RBM7
Anolis carolinensis
ENSACAG00000011589
N
0.714