XM_547294.2 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000003095 T35000_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.958
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.958
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.958
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.958
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000004604 RRM 18 88

Links

Other RRM family RBPs
Other Canis familiaris RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIBMGA008977 Bombyx mori BGIBMGA008977 N 0.000
PPIL4 Gallus gallus ENSGALG00000012364 N 0.000
PPIL4 Meleagris gallopavo ENSMGAG00000012596 N 0.000
ENSOANG00000001063 Ornithorhynchus anatinus ENSOANG00000001063 N 0.000
PPIL4 Takifugu rubripes ENSTRUG00000006670 N 0.000
estExt_fgenesh2_pm.C_1170007 Branchiostoma floridae estExt_fgenesh2_pm.C_1170007 N 0.000
estExt_Genewise1.C_30053 Myceliophthora thermophila estExt_Genewise1.C_30053 N 0.000
estExt_Genewise1Plus.C_12820 Neurospora discreta estExt_Genewise1Plus.C_12820 N 0.000
estExt_Genewise1Plus.C_40228 Batrachochytrium dendrobatidis estExt_Genewise1Plus.C_40228 N 0.000
estExt_Genewise1Plus.C_61472 Cryphonectria parasitica estExt_Genewise1Plus.C_61472 N 0.000
estExt_Genewise1Plus.C_chr_40303 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40303 N 0.000
e_gw.42.57.1 Nematostella vectensis e_gw.42.57.1 N 0.000
e_gw1.6.1078.1 Selaginella moellendorfii e_gw1.6.1078.1 N 0.000
fgenesh1_pm.C_scaffold_9000117 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_9000117 N 0.000
gw1.1.256.1 Neurospora tetrasperma gw1.1.256.1 N 0.000
MGG_10681 Magnaporthe oryzae MGG_10681 N 0.000
NCU10166 Neurospora crassa NCU10166 N 0.000
Pa_2_13850 Podospora anserina Pa_2_13850 N 0.000
PHUM268300 Pediculus humanus PHUM268300 N 0.000
SPPG_03169 Spizellomyces punctatus SPPG_03169 N 0.000
XP_001180629.1 Strongylocentrotus purpuratus XP_001180629.1 N 0.000
XP_001192414.1 Strongylocentrotus purpuratus XP_001192414.1 N 0.000
XP_782627.2 Strongylocentrotus purpuratus XP_782627.2 N 0.000
XP_787384.2 Strongylocentrotus purpuratus XP_787384.2 N 0.000