e_gw1.6.1078.1 (Selaginella moellendorfii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.6.1078.1 T50069_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.6.1078.1 RRM 243 313

Links

Other RRM family RBPs
Other Selaginella moellendorfii RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pm.C_1170007 Branchiostoma floridae estExt_fgenesh2_pm.C_1170007 N 0.775
GJ23668 Drosophila virilis FBgn0210765 N 0.761
GI24038 Drosophila mojavensis FBgn0146761 N 0.761
PPIL4 Takifugu rubripes ENSTRUG00000006670 N 0.761
GH18460 Drosophila grimshawi FBgn0125927 N 0.761
PPIL4 Oryzias latipes ENSORLG00000015310 N 0.761
LOAG_08216 Loa loa LOAG_08216 N 0.761
GL13859 Drosophila persimilis FBgn0151464 N 0.761
GF18772 Drosophila ananassae FBgn0095789 N 0.761
GA26948-RA Drosophila pseudoobscura FBgn0248319 N 0.761
gw1.12.00.150.1 Ostreococcus tauri gw1.12.00.150.1 N 0.761
gwEuk.12.143.1 Ostreococcus lucimarinus gwEuk.12.143.1 N 0.746
PPIL4 Gallus gallus ENSGALG00000012364 N 0.746
PPIL4 Meleagris gallopavo ENSMGAG00000012596 N 0.746
ENSOANG00000001063 Ornithorhynchus anatinus ENSOANG00000001063 N 0.746
FOXG_13736 Fusarium oxysporum FOXG_13736 N 0.746
PPIL4 Tetraodon nigroviridis ENSTNIG00000002706 N 0.746
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.746
estExt_Genewise1.C_30053 Myceliophthora thermophila estExt_Genewise1.C_30053 N 0.746
PPIL4 Gasterosteus aculeatus ENSGACG00000006639 N 0.746
ppil4 Danio rerio ENSDARG00000043854 N 0.746
ppil4 Xenopus tropicalis ENSXETG00000021385 N 0.746
FVEG_11166 Fusarium verticillioides FVEG_11166 N 0.746
EuGene.1200010297 Ostreococcus RCC809 EuGene.1200010297 N 0.746
ENSCSAVG00000010619 Ciona savignyi ENSCSAVG00000010619 N 0.746
GG12319 Drosophila erecta FBgn0104609 N 0.732
GD18267 Drosophila simulans FBgn0189800 N 0.732
GM23461 Drosophila sechellia FBgn0178328 N 0.732
PPIL4 Macaca mulatta ENSMMUG00000023067 N 0.732
SJAG_00470 Schizosaccharomyces japonicus SJAG_00470 N 0.732
PPIL4 Anolis carolinensis ENSACAG00000006936 N 0.732
PPIL4 Cavia porcellus ENSCPOG00000014614 N 0.732
PPIL4 Equus caballus ENSECAG00000021819 N 0.732
PPIL4 Gorilla gorilla ENSGGOG00000009686 N 0.732
PPIL4 Homo sapiens ENSG00000131013 N 0.732
Q6JDI1_CANFA Canis familiaris ENSCAFG00000000379 N 0.732
A6QP53_BOVIN Bos taurus ENSBTAG00000016980 N 0.732
PPIL4 Myotis lucifugus ENSMLUG00000002766 N 0.732
PPIL4 Microcebus murinus ENSMICG00000006287 N 0.732
nasonia_NCBI_hmm783174 Nasonia vitripennis nasonia_NCBI_hmm783174 N 0.732
PPIL4 Loxodonta africana ENSLAFG00000026804 N 0.732
SPPG_03169 Spizellomyces punctatus SPPG_03169 N 0.732
PPIL4 Otolemur garnettii ENSOGAG00000014153 N 0.732
gw1.1.256.1 Neurospora tetrasperma gw1.1.256.1 N 0.732
fgenesh1_pm.sca_11_chr8_3_0000173 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000173 N 0.732
PPIL4 Taeniopygia guttata ENSTGUG00000010655 N 0.732
cyp6 Schizosaccharomyces pombe SPBC17G9.05 N 0.732
PPIL4 Sorex araneus ENSSARG00000011244 N 0.732
PPIL4 Tursiops truncatus ENSTTRG00000006014 N 0.732
e_gw1.11.236.1 Trichoderma atroviride e_gw1.11.236.1 N 0.732
e_gw.42.57.1 Nematostella vectensis e_gw.42.57.1 N 0.732
CG5808 Drosophila melanogaster FBgn0027617 N 0.732
estExt_Genewise1Plus.C_12820 Neurospora discreta estExt_Genewise1Plus.C_12820 N 0.732
PPIL4 Vicugna pacos ENSVPAG00000005157 N 0.732
NCU10166 Neurospora crassa NCU10166 N 0.732
Ppil4 Rattus norvegicus ENSRNOG00000015552 N 0.732
PPIL4 Ochotona princeps ENSOPRG00000005619 N 0.732
PPIL4 Oryctolagus cuniculus ENSOCUG00000007696 N 0.732
FGSG_04479 Fusarium graminearum FGSG_04479 N 0.732
Ppil4 Mus musculus ENSMUSG00000015757 N 0.732
PPIL4 Procavia capensis ENSPCAG00000008203 N 0.732
Pa_2_13850 Podospora anserina Pa_2_13850 N 0.732
Ame_R008665 Ailuropoda melanoleuca Ame_R008665 N 0.732
PPIL4 Pteropus vampyrus ENSPVAG00000000746 N 0.732
PPIL4 Pan troglodytes ENSPTRG00000018692 N 0.732
GE10772 Drosophila yakuba FBgn0228614 N 0.732
PPIL4 Monodelphis domestica ENSMODG00000016825 N 0.732
SPOG_01415 Schizosaccharomyces cryophilus SPOG_01415 N 0.718
BGIBMGA008977 Bombyx mori BGIBMGA008977 N 0.718
PHUM268300 Pediculus humanus PHUM268300 N 0.718
estExt_Genewise1Plus.C_11662 Tremella mesenterica estExt_Genewise1Plus.C_11662 N 0.718
estExt_Genewise1Plus.C_61472 Cryphonectria parasitica estExt_Genewise1Plus.C_61472 N 0.718
PPIL4 Erinaceus europaeus ENSEEUG00000000959 N 0.718
PierreAnnot2.00074 Micromonas pusilla PierreAnnot2.00074 N 0.718
fgenesh1_pm.C_scaffold_3000471 Trichoderma virens fgenesh1_pm.C_scaffold_3000471 N 0.718
estExt_fgenesh3_pm.C_240021 Chlorella NC64A estExt_fgenesh3_pm.C_240021 N 0.718
estExt_Genewise1Plus.C_40228 Batrachochytrium dendrobatidis estExt_Genewise1Plus.C_40228 N 0.718
estExt_Genewise1Plus.C_40585 Mucor circinelloides estExt_Genewise1Plus.C_40585 N 0.718
estExt_GeneWisePlus.C_270056 Trichoderma reesei estExt_GeneWisePlus.C_270056 N 0.718
XP_001192414.1 Strongylocentrotus purpuratus XP_001192414.1 N 0.718
XP_001180629.1 Strongylocentrotus purpuratus XP_001180629.1 N 0.718
RO3G_06974 Rhizopus oryzae RO3G_06974 N 0.718
e_gw1.6.80.1 Monosiga brevicollis e_gw1.6.80.1 N 0.718
WUBG_04730 Wuchereria bancrofti WUBG_04730 N 0.718
amel4_ncbi_hmm11961 Apis mellifera amel4_ncbi_hmm11961 N 0.718
amel4_ncbi_hmm35613 Apis mellifera amel4_ncbi_hmm35613 N 0.718
XP_782627.2 Strongylocentrotus purpuratus XP_782627.2 N 0.718
MGG_10681 Magnaporthe oryzae MGG_10681 N 0.718
XP_787384.2 Strongylocentrotus purpuratus XP_787384.2 N 0.718
CAOG_07850 Capsaspora owczarzaki CAOG_07850 N 0.718
CHGG_06839 Chaetomium globosum CHGG_06839 N 0.718
GK13166 Drosophila willistoni FBgn0215175 N 0.718
e_gw1.20.215.1 Phycomyces blakesleeanus e_gw1.20.215.1 N 0.704
EIN_223600 Entamoeba invadens EIN_223600 N 0.704
Aqu1.223583 Amphimedon queenslandica Aqu1.223583 N 0.704
ANIA_09095 Aspergillus nidulans CADANIAG00009519 N 0.704
EAT81165.2 Phaeosphaeria nodorum EAT81165.2 N 0.704
PredSwiss_ASS2010_933.2 Pneumocystis carinii PredSwiss_ASS2010_933.2 N 0.704
PredSwiss_CON599.3 Pneumocystis carinii PredSwiss_CON599.3 N 0.704
gw1.13.70.1 Lottia gigantea gw1.13.70.1 N 0.704
fgeneshTA2_pg.C_scaffold_8000290 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_8000290 N 0.704
estExt_Genewise1.C_23809 Thielavia terrestris estExt_Genewise1.C_23809 N 0.704
estExt_Genewise1Plus.C_chr_40303 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40303 N 0.704
EDO07903.1 Babesia bovis EDO07903.1 N 0.704
MDP0000256261 Malus x domestica MDP0000256261 N 0.704
AGAP008136 Anopheles gambiae AGAP008136 N 0.704
BRADI2G41160 Brachypodium distachyon BRADI2G41160 N 0.704
SNOG_11457 Stagonospora nodorum SNOG_11457 N 0.704
PTRG_04608 Pyrenophora tritici repentis PTRG_04608 N 0.704
MCYG_06073 Microsporum canis MCYG_06073 N 0.704
MGYG_05886 Microsporum gypseum MGYG_05886 N 0.704
PPIL4 Spermophilus tridecemlineatus ENSSTOG00000013980 N 0.704