Rbm46 (Dipodomys ordii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDORG00000006405 T36460_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM46
M052_0.6 		Homo sapiens RAUSAWD RNAcompete
Ray et al.(2013)
RNCMPT00054 		0.965
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000005995 RRM 69 130
ENSDORP00000005995 RRM 143 210
ENSDORP00000005995 RRM 238 302

Links

Other RRM family RBPs
Other Dipodomys ordii RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017652 Ailuropoda melanoleuca Ame_R017652 I 0.708
Ame_R017773 Ailuropoda melanoleuca Ame_R017773 I 0.965
RBM47 Anolis carolinensis ENSACAG00000011833 I 0.708
RBM46 Anolis carolinensis ENSACAG00000015599 I 0.960
RBM46 Bos taurus ENSBTAG00000001696 I 0.960
A5D9E0_BOVIN Bos taurus ENSBTAG00000002356 I 0.708
RBM46 Canis familiaris ENSCAFG00000008473 I 0.985
RBM46 Choloepus hoffmanni ENSCHOG00000003429 I 0.965
RBM47 Choloepus hoffmanni ENSCHOG00000011731 I 0.708
LOC100409217 Callithrix jacchus ENSCJAG00000001768 I 0.955
LOC100410421 Callithrix jacchus ENSCJAG00000019385 I 0.708
ENSCPOG00000010284 Cavia porcellus ENSCPOG00000010284 I 0.950
RBM47 Cavia porcellus ENSCPOG00000014100 I 0.708
ENSCPOG00000019272 Cavia porcellus ENSCPOG00000019272 I 0.920
ENSCPOG00000020396 Cavia porcellus ENSCPOG00000020396 I 0.931
rbm46 Danio rerio ENSDARG00000079452 I 0.781
RBM47 Dasypus novemcinctus ENSDNOG00000006858 I 0.708
RBM46 Dasypus novemcinctus ENSDNOG00000016195 I 0.955
LOC100063743 Equus caballus ENSECAG00000004400 I 0.706
RBM46 Equus caballus ENSECAG00000007649 I 0.951
RBM46 Erinaceus europaeus ENSEEUG00000011824 I 0.920
RBM47 Echinops telfairi ENSETEG00000009194 I 0.708
RBM46 Echinops telfairi ENSETEG00000014902 I 0.965
RBM46 Felis catus ENSFCAG00000009246 I 0.950
RBM47 Felis catus ENSFCAG00000012399 I 0.708
RBM46 Homo sapiens ENSG00000151962 D 0.965
RBM47 Homo sapiens ENSG00000163694 I 0.708
RBM46 Gallus gallus ENSGALG00000009278 I 0.858
ENSGALG00000014267 Gallus gallus ENSGALG00000014267 D 0.708
RBM47 Gorilla gorilla ENSGGOG00000001367 I 0.708
RBM46 Gorilla gorilla ENSGGOG00000001876 I 0.965
RBM47 Loxodonta africana ENSLAFG00000011998 I 0.708
RBM46 Loxodonta africana ENSLAFG00000015448 I 0.960
RBM47 Macropus eugenii ENSMEUG00000009516 I 0.718
RBM46 Macropus eugenii ENSMEUG00000013328 I 0.960
RBM46 Meleagris gallopavo ENSMGAG00000001457 I 0.754
RBM47 Meleagris gallopavo ENSMGAG00000012226 I 0.708
RBM46 Myotis lucifugus ENSMLUG00000003221 I 0.960
RBM47 Macaca mulatta ENSMMUG00000012036 I 0.708
RBM46 Macaca mulatta ENSMMUG00000021147 I 0.965
RBM46 Monodelphis domestica ENSMODG00000001302 I 0.965
ENSMODG00000007003 Monodelphis domestica ENSMODG00000007003 I 0.718
Rbm46 Mus musculus ENSMUSG00000033882 I 0.955
Rbm47 Mus musculus ENSMUSG00000070780 I 0.703
RBM46 Ornithorhynchus anatinus ENSOANG00000002141 I 0.934
RBM47 Ornithorhynchus anatinus ENSOANG00000008978 I 0.703
RBM47 Oryctolagus cuniculus ENSOCUG00000012034 I 0.708
RBM46 Oryctolagus cuniculus ENSOCUG00000017859 I 0.965
RBM46 Ochotona princeps ENSOPRG00000007136 I 0.851
RBM47 Procavia capensis ENSPCAG00000011879 I 0.708
ENSPPYG00000015144 Pongo pygmaeus ENSPPYG00000015144 I 0.965
RBM47 Pan troglodytes ENSPTRG00000016006 I 0.708
RBM46 Pan troglodytes ENSPTRG00000016538 I 0.965
RBM47 Pteropus vampyrus ENSPVAG00000003812 I 0.708
RBM46 Pteropus vampyrus ENSPVAG00000008376 I 0.965
Rbm47 Rattus norvegicus ENSRNOG00000002408 I 0.703
Rbm46 Rattus norvegicus ENSRNOG00000025823 I 0.965
RBM47 Sorex araneus ENSSARG00000001735 I 0.708
RBM46 Sorex araneus ENSSARG00000006520 I 0.965
RBM47 Sus scrofa ENSSSCG00000008796 I 0.708
RBM46 Sus scrofa ENSSSCG00000008994 I 0.965
RBM46 Tupaia belangeri ENSTBEG00000013949 I 0.950
RBM46 Taeniopygia guttata ENSTGUG00000005307 I 0.900
RBM47 Taeniopygia guttata ENSTGUG00000008705 I 0.708
RBM46 Tetraodon nigroviridis ENSTNIG00000008714 I 0.702
RBM46 Takifugu rubripes ENSTRUG00000004237 I 0.727
RBM46 Tarsius syrichta ENSTSYG00000010435 I 0.955
RBM46 Tursiops truncatus ENSTTRG00000001239 I 0.945
RBM47 Tursiops truncatus ENSTTRG00000002839 I 0.708
ENSXETG00000012802 Xenopus tropicalis ENSXETG00000012802 D 0.703
RBM46_XENTR Xenopus tropicalis ENSXETG00000022412 I 0.804
e_gw.60.249.1 Branchiostoma floridae e_gw.60.249.1 I 0.704