SRSF6 (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGGOG00000009808 T37833_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.760
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.760
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000009578 RRM 4 66
ENSGGOP00000009578 RRM 112 177

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

139 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB08285.1 Alternaria brassicicola AB08285.1 N 0.000
BC1G_15665 Botrytis cinerea BC1G_15665 N 0.000
CHGG_01583 Chaetomium globosum CHGG_01583 N 0.000
EAT89416.2 Phaeosphaeria nodorum EAT89416.2 N 0.000
estExt_fgenesh1_pg.C_160182 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160182 N 0.000
estExt_fgenesh3_kg.C_70160 Neurospora discreta estExt_fgenesh3_kg.C_70160 N 0.000
estExt_Genewise1Plus.C_20994 Myceliophthora thermophila estExt_Genewise1Plus.C_20994 N 0.000
estExt_Genewise1Plus.C_50197 Neurospora tetrasperma estExt_Genewise1Plus.C_50197 N 0.000
estExt_Genewise1Plus.C_chr_61262 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_61262 N 0.000
e_gw1.1.4045.1 Trichoderma atroviride e_gw1.1.4045.1 N 0.000
e_gw1.4.400.1 Trichoderma reesei e_gw1.4.400.1 N 0.000
e_gw1.6.1433.1 Cryphonectria parasitica e_gw1.6.1433.1 N 0.000
e_gw1.7.1285.1 Trichoderma virens e_gw1.7.1285.1 N 0.000
FOXG_00686 Fusarium oxysporum FOXG_00686 N 0.000
FVEG_00825 Fusarium verticillioides FVEG_00825 N 0.000
GLRG_10397 Colletotrichum graminicola GLRG_10397 N 0.000
MGG_09885 Magnaporthe oryzae MGG_09885 N 0.000
NCU03311 Neurospora crassa NCU03311 N 0.000
SNOG_02685 Stagonospora nodorum SNOG_02685 N 0.000
SS1G_09907 Sclerotinia sclerotiorum SS1G_09907 N 0.000
VDAG_04254 Verticillium dahliae VDAG_04254 N 0.000