CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGG_09885
(
Magnaporthe oryzae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGG_09885
T29782_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGG_09885T0
RRM
10
80
VFVGNIPYGLSEEQITDIFSRAGKVLNFRLVYDRETGKPKGFGFAEYPDNDSAASAVRNLNDTEIMGRKLR
Links
Other
RRM
family RBPs
Other
Magnaporthe oryzae
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GLRG_10397
Colletotrichum graminicola
GLRG_10397
N
0.944
e_gw1.6.1433.1
Cryphonectria parasitica
e_gw1.6.1433.1
N
0.915
VDAG_04254
Verticillium dahliae
VDAG_04254
N
0.915
CHGG_01583
Chaetomium globosum
CHGG_01583
N
0.887
estExt_Genewise1Plus.C_50197
Neurospora tetrasperma
estExt_Genewise1Plus.C_50197
N
0.887
estExt_Genewise1Plus.C_20994
Myceliophthora thermophila
estExt_Genewise1Plus.C_20994
N
0.887
NCU03311
Neurospora crassa
NCU03311
N
0.887
estExt_fgenesh3_kg.C_70160
Neurospora discreta
estExt_fgenesh3_kg.C_70160
N
0.887
SS1G_09907
Sclerotinia sclerotiorum
SS1G_09907
N
0.873
BC1G_15665
Botrytis cinerea
BC1G_15665
N
0.873
FOXG_00686
Fusarium oxysporum
FOXG_00686
N
0.859
e_gw1.1.4045.1
Trichoderma atroviride
e_gw1.1.4045.1
N
0.859
FVEG_00825
Fusarium verticillioides
FVEG_00825
N
0.859
e_gw1.4.931.1
Thielavia terrestris
e_gw1.4.931.1
N
0.859
e_gw1.7.1285.1
Trichoderma virens
e_gw1.7.1285.1
N
0.859
e_gw1.4.400.1
Trichoderma reesei
e_gw1.4.400.1
N
0.859
FGSG_00370
Fusarium graminearum
FGSG_00370
N
0.845
fgenesh1_pg.sca_1_chr1_3_0000632
Nectria haematococca
fgenesh1_pg.sca_1_chr1_3_0000632
N
0.845
GSTUMT00004863001
Tuber melanosporum
GSTUMT00004863001
N
0.803
fgenesh1_pg.C_scaffold_8000060
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_8000060
N
0.761
Pa_1_6970
Podospora anserina
Pa_1_6970
N
0.761
estExt_Genewise1Plus.C_chr_61262
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_61262
N
0.732
EAT89416.2
Phaeosphaeria nodorum
EAT89416.2
N
0.732
SNOG_02685
Stagonospora nodorum
SNOG_02685
N
0.732
XP_002159315.1
Hydra magnipapillata
XP_002159315.1
N
0.718
UREG_00968
Uncinocarpus reesii
UREG_00968
N
0.704
SNAPOd2T00016915001
Oikopleura dioica
SNAPOd2T00016915001
N
0.704
estExt_fgenesh1_pg.C_160182
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_160182
N
0.704
AB08285.1
Alternaria brassicicola
AB08285.1
N
0.704