SNOG_02685 (Stagonospora nodorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SNOG_02685 T30598_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SNOT_02685 RRM 11 81

Links

Other RRM family RBPs
Other Stagonospora nodorum RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
EAT89416.2 Phaeosphaeria nodorum EAT89416.2 N 1.000
estExt_fgenesh1_pg.C_160182 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160182 N 0.944
AB08285.1 Alternaria brassicicola AB08285.1 N 0.944
PTRG_02061 Pyrenophora tritici repentis PTRG_02061 N 0.845
estExt_fgenesh3_kg.C_70160 Neurospora discreta estExt_fgenesh3_kg.C_70160 N 0.789
estExt_Genewise1Plus.C_50197 Neurospora tetrasperma estExt_Genewise1Plus.C_50197 N 0.789
NCU03311 Neurospora crassa NCU03311 N 0.789
e_gw1.6.1433.1 Cryphonectria parasitica e_gw1.6.1433.1 N 0.775
estExt_Genewise1Plus.C_20994 Myceliophthora thermophila estExt_Genewise1Plus.C_20994 N 0.775
e_gw1.4.931.1 Thielavia terrestris e_gw1.4.931.1 N 0.775
CHGG_01583 Chaetomium globosum CHGG_01583 N 0.775
BC1G_15665 Botrytis cinerea BC1G_15665 N 0.746
GLRG_10397 Colletotrichum graminicola GLRG_10397 N 0.732
MGG_09885 Magnaporthe oryzae MGG_09885 N 0.732
FGSG_00370 Fusarium graminearum FGSG_00370 N 0.732
SS1G_09907 Sclerotinia sclerotiorum SS1G_09907 N 0.732
fgenesh1_pg.C_scaffold_8000060 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_8000060 N 0.732
GSTUMT00004863001 Tuber melanosporum GSTUMT00004863001 N 0.718
VDAG_04254 Verticillium dahliae VDAG_04254 N 0.718
fgenesh1_pg.sca_1_chr1_3_0000632 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000632 N 0.718
estExt_Genewise1Plus.C_chr_61262 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_61262 N 0.704
FVEG_00825 Fusarium verticillioides FVEG_00825 N 0.704
FOXG_00686 Fusarium oxysporum FOXG_00686 N 0.704