ELAVL4 (Procavia capensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPCAG00000008215 T40353_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		1.000
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		1.000
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		1.000
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.957
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.957
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.957
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.774
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.774
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.774
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.774
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.774
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.774
Rbp9
M124_0.6 		Drosophila melanogaster UUDDGUU RNAcompete
Ray et al.(2013)
RNCMPT00132 		0.736
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000007663 RRM 53 123
ENSPCAP00000007663 RRM 139 207
ENSPCAP00000007663 RRM 304 374

Links

Other RRM family RBPs
Other Procavia capensis RBPs

191 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAF69826 Xenopus laevis AAF69826 N 0.000
AAH84957 Xenopus laevis AAH84957 N 0.000
AAI70337 Xenopus laevis AAI70337 N 0.000
Ame_R016146 Ailuropoda melanoleuca Ame_R016146 N 0.000
BICC1 Anolis carolinensis ENSACAG00000001892 N 0.000
BICC1 Bos taurus ENSBTAG00000010694 N 0.000
BICC1 Canis familiaris ENSCAFG00000012331 N 0.000
BICC1 Choloepus hoffmanni ENSCHOG00000010828 N 0.000
BICC1 Callithrix jacchus ENSCJAG00000010639 N 0.000
BICC1 Cavia porcellus ENSCPOG00000015585 N 0.000
BICC1 Equus caballus ENSECAG00000013979 N 0.000
BICC1 Echinops telfairi ENSETEG00000010754 N 0.000
BICC1 Homo sapiens ENSG00000122870 N 0.000
BICC1 Gallus gallus ENSGALG00000001847 N 0.000
BICC1 Gorilla gorilla ENSGGOG00000005484 N 0.000
BICC1 Loxodonta africana ENSLAFG00000007749 N 0.000
BICC1 Microcebus murinus ENSMICG00000002045 N 0.000
Bicc1 Mus musculus ENSMUSG00000014329 N 0.000
BICC1 Ornithorhynchus anatinus ENSOANG00000013223 N 0.000
BICC1 Oryctolagus cuniculus ENSOCUG00000013696 N 0.000
ENSPPYG00000002429 Pongo pygmaeus ENSPPYG00000002429 N 0.000
BICC1 Pan troglodytes ENSPTRG00000002520 N 0.000
BICC1 Pteropus vampyrus ENSPVAG00000008004 N 0.000
Bicc1 Rattus norvegicus ENSRNOG00000000614 N 0.000
BICC1 Sus scrofa ENSSSCG00000010204 N 0.000
BICC1 Taeniopygia guttata ENSTGUG00000005584 N 0.000
BICC1 Tarsius syrichta ENSTSYG00000004527 N 0.000
BICC1 Tursiops truncatus ENSTTRG00000017309 N 0.000
Q5U4T7 Xenopus laevis Q5U4T7 N 0.000
Q9IA00 Xenopus laevis Q9IA00 N 0.000