CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RCAN2
(
Pteropus vampyrus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPVAG00000006996
T40892_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000006600
RRM
72
128
EDSKEKFEGLFRTYDECVTFQLFKSFRRVRINFSNPKSAARARIELHETQFRGKKLK
Links
Other
RRM
family RBPs
Other
Pteropus vampyrus
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R014199
Ailuropoda melanoleuca
Ame_R014199
N
0.912
RCAN2_BOVIN
Bos taurus
ENSBTAG00000009302
N
0.898
RCAN2
Canis familiaris
ENSCAFG00000002023
N
0.869
ENSCJAG00000010396
Callithrix jacchus
ENSCJAG00000010396
N
0.738
LOC100412694
Callithrix jacchus
ENSCJAG00000012084
N
0.869
RCAN2
Dasypus novemcinctus
ENSDNOG00000012767
N
0.948
LOC100055752
Equus caballus
ENSECAG00000018543
N
0.869
RCAN2
Erinaceus europaeus
ENSEEUG00000006689
N
0.965
RCAN2
Felis catus
ENSFCAG00000014401
N
0.965
RCAN2
Homo sapiens
ENSG00000172348
N
0.965
ENSGGOG00000004672
Gorilla gorilla
ENSGGOG00000004672
N
0.965
RCAN2
Meleagris gallopavo
ENSMGAG00000014275
N
0.895
RCAN2
Myotis lucifugus
ENSMLUG00000015296
N
0.965
RCAN2
Macaca mulatta
ENSMMUG00000019246
N
0.982
RCAN2
Monodelphis domestica
ENSMODG00000018896
N
0.869
RCAN2
Ornithorhynchus anatinus
ENSOANG00000008271
N
0.930
RCAN2
Ochotona princeps
ENSOPRG00000010918
N
0.930
ENSPPYG00000016668
Pongo pygmaeus
ENSPPYG00000016668
N
0.965
RCAN2_PANTR
Pan troglodytes
ENSPTRG00000018233
N
0.965
RCAN2
Sorex araneus
ENSSARG00000000336
N
0.965
RCAN2
Sus scrofa
ENSSSCG00000001716
N
0.869
RCAN2
Tupaia belangeri
ENSTBEG00000007796
N
0.930
RCAN2
Taeniopygia guttata
ENSTGUG00000013243
N
0.931
RCAN2
Tarsius syrichta
ENSTSYG00000007961
N
0.982
RCAN2
Tursiops truncatus
ENSTTRG00000008427
N
0.947
RCAN2
Vicugna pacos
ENSVPAG00000003619
N
0.965