CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RCAN2
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000018896
T39198_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000023575
RRM
22
82
IFTNQEVKEKFEGLFRTYDDCVTFQLFKSFRRVRINFSNPKSAARARIELHETQFRGKKLK
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RCAN2
Ornithorhynchus anatinus
ENSOANG00000008271
N
1.000
LOC100055752
Equus caballus
ENSECAG00000018543
N
0.984
LOC100412694
Callithrix jacchus
ENSCJAG00000012084
N
0.984
ENSGGOG00000004672
Gorilla gorilla
ENSGGOG00000004672
N
0.984
RCAN2
Canis familiaris
ENSCAFG00000002023
N
0.984
RCAN2
Homo sapiens
ENSG00000172348
N
0.984
RCAN2
Sus scrofa
ENSSSCG00000001716
N
0.984
RCAN2
Macaca mulatta
ENSMMUG00000019246
N
0.984
ENSPPYG00000016668
Pongo pygmaeus
ENSPPYG00000016668
N
0.984
RCAN2_PANTR
Pan troglodytes
ENSPTRG00000018233
N
0.984
RCAN2_BOVIN
Bos taurus
ENSBTAG00000009302
N
0.968
RCAN2
Dasypus novemcinctus
ENSDNOG00000012767
N
0.902
RCAN2
Felis catus
ENSFCAG00000014401
N
0.902
RCAN2
Erinaceus europaeus
ENSEEUG00000006689
N
0.902
RCAN2
Tursiops truncatus
ENSTTRG00000008427
N
0.902
RCAN2
Sorex araneus
ENSSARG00000000336
N
0.902
RCAN2
Myotis lucifugus
ENSMLUG00000015296
N
0.902
RCAN2
Vicugna pacos
ENSVPAG00000003619
N
0.902
RCAN2
Tarsius syrichta
ENSTSYG00000007961
N
0.885
RCAN2
Tupaia belangeri
ENSTBEG00000007796
N
0.885
RCAN2
Meleagris gallopavo
ENSMGAG00000014275
N
0.869
Ame_R014199
Ailuropoda melanoleuca
Ame_R014199
N
0.869
RCAN2
Ochotona princeps
ENSOPRG00000010918
N
0.869
RCAN2
Pteropus vampyrus
ENSPVAG00000006996
N
0.869
RCAN2
Taeniopygia guttata
ENSTGUG00000013243
N
0.852
ENSCJAG00000010396
Callithrix jacchus
ENSCJAG00000010396
N
0.754