CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
RCAN2
(
Canis familiaris
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCAFG00000002023
T34985_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000002976
RRM
22
82
VFTNQEVKEKFEGLFRTYDDCVTFQLFKSFRRVRINFSNPKSAARARIELHETQFRGKKLK
Links
Other
RRM
family RBPs
Other
Canis familiaris
RBPs
27 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSGGOG00000004672
Gorilla gorilla
ENSGGOG00000004672
N
1.000
ENSPPYG00000016668
Pongo pygmaeus
ENSPPYG00000016668
N
1.000
RCAN2_PANTR
Pan troglodytes
ENSPTRG00000018233
N
1.000
RCAN2
Sus scrofa
ENSSSCG00000001716
N
1.000
RCAN2
Homo sapiens
ENSG00000172348
N
1.000
RCAN2
Macaca mulatta
ENSMMUG00000019246
N
1.000
LOC100055752
Equus caballus
ENSECAG00000018543
N
1.000
LOC100412694
Callithrix jacchus
ENSCJAG00000012084
N
1.000
RCAN2_BOVIN
Bos taurus
ENSBTAG00000009302
N
0.984
RCAN2
Monodelphis domestica
ENSMODG00000018896
N
0.984
RCAN2
Ornithorhynchus anatinus
ENSOANG00000008271
N
0.984
RCAN2
Sorex araneus
ENSSARG00000000336
N
0.902
RCAN2
Erinaceus europaeus
ENSEEUG00000006689
N
0.902
RCAN2
Vicugna pacos
ENSVPAG00000003619
N
0.902
RCAN2
Dasypus novemcinctus
ENSDNOG00000012767
N
0.902
RCAN2
Tursiops truncatus
ENSTTRG00000008427
N
0.902
RCAN2
Felis catus
ENSFCAG00000014401
N
0.902
RCAN2
Myotis lucifugus
ENSMLUG00000015296
N
0.902
RCAN2
Tupaia belangeri
ENSTBEG00000007796
N
0.885
RCAN2
Tarsius syrichta
ENSTSYG00000007961
N
0.885
Ame_R014199
Ailuropoda melanoleuca
Ame_R014199
N
0.869
RCAN2
Ochotona princeps
ENSOPRG00000010918
N
0.869
RCAN2
Meleagris gallopavo
ENSMGAG00000014275
N
0.869
RCAN2
Pteropus vampyrus
ENSPVAG00000006996
N
0.869
RCAN2
Taeniopygia guttata
ENSTGUG00000013243
N
0.852
ENSCJAG00000010396
Callithrix jacchus
ENSCJAG00000010396
N
0.769
RCAN3
Takifugu rubripes
ENSTRUG00000010027
N
0.705