ENSSSCG00000016275 (Sus scrofa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSSCG00000016275 T41533_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NCL
M245_0.6 		Homo sapiens CCGAAAKCCCGAAGYAGG SELEX
Cook et al.(2011)
1004_8676391 		0.841
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000017242 RRM 1 31
ENSSSCP00000017242 RRM 49 114
ENSSSCP00000017242 RRM 142 208
ENSSSCP00000017242 RRM 228 295

Links

Other RRM family RBPs
Other Sus scrofa RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava42571.valid.m1 Manihot esculenta cassava42571.valid.m1 N 0.000
GSVIVG00036082001 Vitis vinifera GSVIVG00036082001 N 0.000