ENSSSCG00000016275 (Sus scrofa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSSCG00000016275 T41533_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NCL
M245_0.6 		Homo sapiens CCGAAAKCCCGAAGYAGG SELEX
Cook et al.(2011)
1004_8676391 		0.841
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000017242 RRM 1 31
ENSSSCP00000017242 RRM 49 114
ENSSSCP00000017242 RRM 142 208
ENSSSCP00000017242 RRM 228 295

Links

Other RRM family RBPs
Other Sus scrofa RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R003783 Ailuropoda melanoleuca Ame_R003783 N 0.000
RBM18 Canis familiaris ENSCAFG00000020274 N 0.000
RBM18 Choloepus hoffmanni ENSCHOG00000001341 N 0.000
LOC100393108 Callithrix jacchus ENSCJAG00000020116 N 0.000
RBM18 Cavia porcellus ENSCPOG00000013811 N 0.000
Rbm18 Dipodomys ordii ENSDORG00000015862 N 0.000
LOC100067544 Equus caballus ENSECAG00000024639 N 0.000
RBM18 Echinops telfairi ENSETEG00000009832 N 0.000
RBM18 Homo sapiens ENSG00000119446 N 0.000
RBM18 Gallus gallus ENSGALG00000001339 N 0.000
RBM18 Gorilla gorilla ENSGGOG00000011052 N 0.000
RBM18 Loxodonta africana ENSLAFG00000012134 N 0.000
RBM18 Macaca mulatta ENSMMUG00000011455 N 0.000
RBM18 Monodelphis domestica ENSMODG00000019688 N 0.000
Rbm18 Mus musculus ENSMUSG00000026889 N 0.000
RBM18 Ornithorhynchus anatinus ENSOANG00000008200 N 0.000
RBM18 Oryctolagus cuniculus ENSOCUG00000008527 N 0.000
RBM18 Otolemur garnettii ENSOGAG00000015104 N 0.000
RBM18 Ochotona princeps ENSOPRG00000010381 N 0.000
RBM18 Procavia capensis ENSPCAG00000011245 N 0.000
ENSPPYG00000019569 Pongo pygmaeus ENSPPYG00000019569 N 0.000
RBM18 Pan troglodytes ENSPTRG00000021323 N 0.000
RBM18 Pteropus vampyrus ENSPVAG00000000863 N 0.000
Rbm18 Rattus norvegicus ENSRNOG00000006763 N 0.000
RBM18 Taeniopygia guttata ENSTGUG00000006802 N 0.000
RBM18 Vicugna pacos ENSVPAG00000008618 N 0.000