CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Ame_R003783
(
Ailuropoda melanoleuca
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Ame_R003783
T55508_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ame_R003783
RRM
27
100
LWIGNLDPKITEYHLLKLLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLV
Links
Other
RRM
family RBPs
Other
Ailuropoda melanoleuca
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM18
Pteropus vampyrus
ENSPVAG00000000863
N
1.000
LOC100067544
Equus caballus
ENSECAG00000024639
N
1.000
RBM18
Canis familiaris
ENSCAFG00000020274
N
1.000
RBM18
Vicugna pacos
ENSVPAG00000008618
N
1.000
RBM18
Ochotona princeps
ENSOPRG00000010381
N
0.986
RBM18
Otolemur garnettii
ENSOGAG00000015104
N
0.986
Rbm18
Mus musculus
ENSMUSG00000026889
N
0.986
RBM18
Loxodonta africana
ENSLAFG00000012134
N
0.986
ENSPPYG00000019569
Pongo pygmaeus
ENSPPYG00000019569
N
0.986
RBM18
Sus scrofa
ENSSSCG00000005531
N
0.986
RBM18
Pan troglodytes
ENSPTRG00000021323
N
0.986
RBM18
Gorilla gorilla
ENSGGOG00000011052
N
0.986
RBM18
Procavia capensis
ENSPCAG00000011245
N
0.986
RBM18
Macaca mulatta
ENSMMUG00000011455
N
0.986
RBM18
Cavia porcellus
ENSCPOG00000013811
N
0.986
LOC100393108
Callithrix jacchus
ENSCJAG00000020116
N
0.986
RBM18_BOVIN
Bos taurus
ENSBTAG00000016367
N
0.986
RBM18
Echinops telfairi
ENSETEG00000009832
N
0.986
Rbm18
Dipodomys ordii
ENSDORG00000015862
N
0.986
RBM18
Homo sapiens
ENSG00000119446
N
0.986
RBM18
Oryctolagus cuniculus
ENSOCUG00000008527
N
0.973
Rbm18
Rattus norvegicus
ENSRNOG00000006763
N
0.973
RBM18
Gallus gallus
ENSGALG00000001339
N
0.973
RBM18
Felis catus
ENSFCAG00000011188
N
0.959
AAH81007
Xenopus laevis
AAH81007
N
0.905
Q66J99
Xenopus laevis
Q66J99
N
0.905
rbm18
Xenopus tropicalis
ENSXETG00000016328
N
0.905
RBM18
Ornithorhynchus anatinus
ENSOANG00000008200
N
0.812
RBM18
Monodelphis domestica
ENSMODG00000019688
N
0.705
RBM18
Choloepus hoffmanni
ENSCHOG00000001341
N
0.705
RBM18
Tupaia belangeri
ENSTBEG00000016520
N
0.705