CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM18
(
Choloepus hoffmanni
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCHOG00000001341
T35241_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000001187
RRM
2
62
HLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLV
Links
Other
RRM
family RBPs
Other
Choloepus hoffmanni
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM18
Monodelphis domestica
ENSMODG00000019688
N
1.000
RBM18
Tupaia belangeri
ENSTBEG00000016520
N
1.000
RBM18
Taeniopygia guttata
ENSTGUG00000006802
N
0.968
RBM18
Ornithorhynchus anatinus
ENSOANG00000008200
N
0.811
RBM18
Procavia capensis
ENSPCAG00000011245
N
0.718
RBM18
Ochotona princeps
ENSOPRG00000010381
N
0.718
RBM18
Echinops telfairi
ENSETEG00000009832
N
0.718
ENSPPYG00000019569
Pongo pygmaeus
ENSPPYG00000019569
N
0.718
RBM18
Pan troglodytes
ENSPTRG00000021323
N
0.718
RBM18
Cavia porcellus
ENSCPOG00000013811
N
0.718
Rbm18
Dipodomys ordii
ENSDORG00000015862
N
0.718
LOC100393108
Callithrix jacchus
ENSCJAG00000020116
N
0.718
RBM18
Otolemur garnettii
ENSOGAG00000015104
N
0.718
RBM18
Loxodonta africana
ENSLAFG00000012134
N
0.718
RBM18
Gorilla gorilla
ENSGGOG00000011052
N
0.718
RBM18
Homo sapiens
ENSG00000119446
N
0.718
RBM18
Macaca mulatta
ENSMMUG00000011455
N
0.718
Rbm18
Mus musculus
ENSMUSG00000026889
N
0.718
RBM18
Vicugna pacos
ENSVPAG00000008618
N
0.705
Ame_R003783
Ailuropoda melanoleuca
Ame_R003783
N
0.705
RBM18
Canis familiaris
ENSCAFG00000020274
N
0.705
RBM18
Pteropus vampyrus
ENSPVAG00000000863
N
0.705
LOC100067544
Equus caballus
ENSECAG00000024639
N
0.705
RBM18
Oryctolagus cuniculus
ENSOCUG00000008527
N
0.705
Rbm18
Rattus norvegicus
ENSRNOG00000006763
N
0.705
RBM18
Gallus gallus
ENSGALG00000001339
N
0.705