celf1 (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000009044 T42856_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000019815 RRM 45 115
ENSXETP00000019815 RRM 150 218
ENSXETP00000019815 RRM 447 517
ENSXETP00000019816 RRM 18 88
ENSXETP00000019816 RRM 110 178
ENSXETP00000019816 RRM 407 477

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_07112 Botrytis cinerea BC1G_07112 N 0.000
estExt_fgenesh1_pg.C_20306 Cryphonectria parasitica estExt_fgenesh1_pg.C_20306 N 0.000
estExt_fgenesh2_kg.C_60272 Thielavia terrestris estExt_fgenesh2_kg.C_60272 N 0.000
estExt_Genewise1.C_100053 Neurospora discreta estExt_Genewise1.C_100053 N 0.000
estExt_Genewise1.C_70072 Myceliophthora thermophila estExt_Genewise1.C_70072 N 0.000
estExt_Genewise1Plus.C_230153 Neurospora tetrasperma estExt_Genewise1Plus.C_230153 N 0.000
e_gw1.12.113.1 Trichoderma virens e_gw1.12.113.1 N 0.000
e_gw1.5.255.1 Trichoderma atroviride e_gw1.5.255.1 N 0.000
fgenesh5_pg.C_scaffold_20000146 Trichoderma reesei fgenesh5_pg.C_scaffold_20000146 N 0.000
FGSG_04349 Fusarium graminearum FGSG_04349 N 0.000
FOXG_13887 Fusarium oxysporum FOXG_13887 N 0.000
GLRG_08153 Colletotrichum graminicola GLRG_08153 N 0.000
gw1.11.93.1 Nectria haematococca gw1.11.93.1 N 0.000
MGG_12809 Magnaporthe oryzae MGG_12809 N 0.000
NCU09352 Neurospora crassa NCU09352 N 0.000
Pa_3_11410 Podospora anserina Pa_3_11410 N 0.000
SS1G_05361 Sclerotinia sclerotiorum SS1G_05361 N 0.000
VDAG_01251 Verticillium dahliae VDAG_01251 N 0.000