fgenesh5_pg.C_scaffold_20000146 (Trichoderma reesei)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 fgenesh5_pg.C_scaffold_20000146 T21129_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh5_pg.C_scaffold_20000146 KH 193 255
fgenesh5_pg.C_scaffold_20000146 KH 291 354
fgenesh5_pg.C_scaffold_20000146 KH 398 460

Links

Other KH family RBPs
Other Trichoderma reesei RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.12.113.1 Trichoderma virens e_gw1.12.113.1 N 0.984
e_gw1.5.255.1 Trichoderma atroviride e_gw1.5.255.1 N 0.958
gw1.11.93.1 Nectria haematococca gw1.11.93.1 N 0.927
FGSG_04349 Fusarium graminearum FGSG_04349 N 0.908
GLRG_08153 Colletotrichum graminicola GLRG_08153 N 0.905
FVEG_11314 Fusarium verticillioides FVEG_11314 N 0.901
FOXG_13887 Fusarium oxysporum FOXG_13887 N 0.901
VDAG_01251 Verticillium dahliae VDAG_01251 N 0.814
estExt_fgenesh1_pg.C_20306 Cryphonectria parasitica estExt_fgenesh1_pg.C_20306 N 0.781
BC1G_07112 Botrytis cinerea BC1G_07112 N 0.776
SS1G_05361 Sclerotinia sclerotiorum SS1G_05361 N 0.776
MGG_12809 Magnaporthe oryzae MGG_12809 N 0.772
estExt_Genewise1.C_70072 Myceliophthora thermophila estExt_Genewise1.C_70072 N 0.762
estExt_Genewise1.C_100053 Neurospora discreta estExt_Genewise1.C_100053 N 0.755
NCU09352 Neurospora crassa NCU09352 N 0.755
estExt_Genewise1Plus.C_230153 Neurospora tetrasperma estExt_Genewise1Plus.C_230153 N 0.755
Pa_3_11410 Podospora anserina Pa_3_11410 N 0.736
estExt_fgenesh2_kg.C_60272 Thielavia terrestris estExt_fgenesh2_kg.C_60272 N 0.731