VDAG_01251 (Verticillium dahliae)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 VDAG_01251 T17902_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDAG_01251T0 KH 218 283
VDAG_01251T0 KH 320 383
VDAG_01251T0 KH 424 487

Links

Other KH family RBPs
Other Verticillium dahliae RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GLRG_08153 Colletotrichum graminicola GLRG_08153 N 0.830
e_gw1.12.113.1 Trichoderma virens e_gw1.12.113.1 N 0.814
fgenesh5_pg.C_scaffold_20000146 Trichoderma reesei fgenesh5_pg.C_scaffold_20000146 N 0.814
FGSG_04349 Fusarium graminearum FGSG_04349 N 0.811
gw1.11.93.1 Nectria haematococca gw1.11.93.1 N 0.809
e_gw1.5.255.1 Trichoderma atroviride e_gw1.5.255.1 N 0.809
FVEG_11314 Fusarium verticillioides FVEG_11314 N 0.790
FOXG_13887 Fusarium oxysporum FOXG_13887 N 0.790
estExt_Genewise1.C_70072 Myceliophthora thermophila estExt_Genewise1.C_70072 N 0.770
NCU09352 Neurospora crassa NCU09352 N 0.760
estExt_Genewise1.C_100053 Neurospora discreta estExt_Genewise1.C_100053 N 0.760
estExt_Genewise1Plus.C_230153 Neurospora tetrasperma estExt_Genewise1Plus.C_230153 N 0.760
estExt_fgenesh2_kg.C_60272 Thielavia terrestris estExt_fgenesh2_kg.C_60272 N 0.755
SS1G_05361 Sclerotinia sclerotiorum SS1G_05361 N 0.730
BC1G_07112 Botrytis cinerea BC1G_07112 N 0.730
Pa_3_11410 Podospora anserina Pa_3_11410 N 0.730
estExt_fgenesh1_pg.C_20306 Cryphonectria parasitica estExt_fgenesh1_pg.C_20306 N 0.724
MGG_12809 Magnaporthe oryzae MGG_12809 N 0.714