CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Sb03g045720
(
Sorghum bicolor
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Sb03g045720
T45970_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb03g045720.1
RRM
56
126
VYIGHIPHGFYEDEMQGFFKQFGDIKRLRIARNRKTGKSKHYGFIEFESPVVAKIVADEMNNYLLFEHTLQ
Sb03g045720.2
RRM
56
126
VYIGHIPHGFYEDEMQGFFKQFGDIKRLRIARNRKTGKSKHYGFIEFESPVVAKIVADEMNNYLLFEHTLQ
Links
Other
RRM
family RBPs
Other
Sorghum bicolor
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPA3
Anolis carolinensis
ENSACAG00000012234
I
0.000
ENSCAFG00000023240
Canis familiaris
ENSCAFG00000023240
I
0.000
ENSPPYG00000001326
Pongo pygmaeus
ENSPPYG00000001326
I
0.000
D3ZB90_RAT
Rattus norvegicus
ENSRNOG00000038392
N
0.000