pab2 (Schizosaccharomyces pombe)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SPBC16E9.12c T46192_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SPBC16E9.12c-1 RRM 57 126

Links

Other RRM family RBPs
Other Schizosaccharomyces pombe RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30147.m014356 Ricinus communis 30147.m014356 N 0.714
30147.m014359 Ricinus communis 30147.m014359 N 0.729
cassava18862.valid.m1 Manihot esculenta cassava18862.valid.m1 N 0.714
cassava44009.valid.m1 Manihot esculenta cassava44009.valid.m1 N 0.714
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.700
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.700
Cucsa.093920 Cucumis sativus Cucsa.093920 N 0.743
estExt_fgenesh1_pg.C_4220012 Physcomitrella patens estExt_fgenesh1_pg.C_4220012 N 0.714
estExt_Genewise1.C_11041 Mucor circinelloides estExt_Genewise1.C_11041 N 0.700
estExt_Genewise1.C_260003 Chlorella vulgaris estExt_Genewise1.C_260003 N 0.700
estExt_Genewise1.C_260068 Coccomyxa C 169 estExt_Genewise1.C_260068 N 0.700
estExt_Genewise1.C_30470 Physcomitrella patens estExt_Genewise1.C_30470 N 0.714
estExt_Genewise1.C_4330008 Physcomitrella patens estExt_Genewise1.C_4330008 N 0.714
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.700
e_gw1.0.1424.1 Selaginella moellendorfii e_gw1.0.1424.1 N 0.729
e_gw1.26.703.1 Selaginella moellendorfii e_gw1.26.703.1 N 0.729
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.714
fgenesh1_pm.C_scaffold_6000038 Sporobolomyces roseus fgenesh1_pm.C_scaffold_6000038 N 0.714
Glyma05g31030.1 Glycine max Glyma05g31030.1 N 0.700
Glyma08g14240.1 Glycine max Glyma08g14240.1 N 0.700
Glyma10g33490.1 Glycine max Glyma10g33490.1 N 0.714
Glyma20g34100.1 Glycine max Glyma20g34100.1 N 0.714
gw1.9.256.1 Chlorella NC64A gw1.9.256.1 N 0.714
MCYG_08495 Microsporum canis MCYG_08495 N 0.700
MDP0000243651 Malus x domestica MDP0000243651 N 0.714
mgf005737m Mimulus guttatus mgf005737m N 0.700
mgf006490m Mimulus guttatus mgf006490m N 0.700
mgf023117m Mimulus guttatus mgf023117m N 0.700
PGTG_01300 Puccinia graminis PGTG_01300 N 0.700
PK23225.1 Cannabis sativa PK23225.1 N 0.714
B9NAP4_POPTR Populus trichocarpa POPTR_0012s11480 N 0.714
B9ICE3_POPTR Populus trichocarpa POPTR_0015s12230 N 0.714
ppa010052m Prunus persica ppa010052m N 0.714
PredSwiss_CON654.3 Pneumocystis carinii PredSwiss_CON654.3 I 0.700
PTTG_05043 Puccinia triticina PTTG_05043 N 0.700
SJAG_04601 Schizosaccharomyces japonicus SJAG_04601 N 0.886
SOCG_03627 Schizosaccharomyces octosporus SOCG_03627 N 0.915
SPOG_04110 Schizosaccharomyces cryophilus SPOG_04110 N 0.915
UM02401 Ustilago maydis UM02401 N 0.714
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.700