SOCG_03627 (Schizosaccharomyces octosporus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SOCG_03627 T30703_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SOCG_03627T0 RRM 57 126

Links

Other RRM family RBPs
Other Schizosaccharomyces octosporus RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPOG_04110 Schizosaccharomyces cryophilus SPOG_04110 N 1.000
pab2 Schizosaccharomyces pombe SPBC16E9.12c N 0.915
SJAG_04601 Schizosaccharomyces japonicus SJAG_04601 N 0.831
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.718
UM02401 Ustilago maydis UM02401 N 0.718
Pa_4_2600 Podospora anserina Pa_4_2600 N 0.714
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.714
Cucsa.093920 Cucumis sativus Cucsa.093920 N 0.704
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.704
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.704
e_gw1.26.703.1 Selaginella moellendorfii e_gw1.26.703.1 N 0.704
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.704
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.704
B9NAP4_POPTR Populus trichocarpa POPTR_0012s11480 N 0.704
estExt_Genewise1.C_11041 Mucor circinelloides estExt_Genewise1.C_11041 N 0.704
MCYG_08495 Microsporum canis MCYG_08495 N 0.704
estExt_fgenesh1_kg.C_50066 Myceliophthora thermophila estExt_fgenesh1_kg.C_50066 N 0.700
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.700