185543 (Helobdella robusta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 185543 T48584_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
U2AF2
M077_0.6 		Homo sapiens UUUUUYC RNAcompete
Ray et al.(2013)
RNCMPT00079 		0.787
U2af50
M078_0.6 		Drosophila melanogaster UUUUUYY RNAcompete
Ray et al.(2013)
RNCMPT00080 		0.735
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
185543 RRM 128 202
185543 RRM 242 312
185543 RRM 373 437

Links

Other RRM family RBPs
Other Helobdella robusta RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_13853 Botrytis cinerea BC1G_13853 N 0.000
ACLA_013700 Aspergillus clavatus CADACLAG00000914 N 0.000
AFLA_119410 Aspergillus flavus CADAFLAG00012513 N 0.000
AFUA_5G10830 Aspergillus fumigatus CADAFUAG00006235 N 0.000
ANIA_04721 Aspergillus nidulans CADANIAG00005708 N 0.000
AO090010000458 Aspergillus oryzae CADAORAG00004519 N 0.000
ATEG_07640 Aspergillus terreus CADATEAG00000474 N 0.000
NFIA_076400 Neosartorya fischeri CADNFIAG00008573 N 0.000
CPSG_07949 Coccidioides posadasii CPSG_07949 N 0.000
estExt_fgenesh1_pg.C_30380 Cryphonectria parasitica estExt_fgenesh1_pg.C_30380 N 0.000
estExt_fgenesh1_pg.C_40021 Neurospora tetrasperma estExt_fgenesh1_pg.C_40021 N 0.000
estExt_fgenesh2_pg.C_30399 Neurospora discreta estExt_fgenesh2_pg.C_30399 N 0.000
GLRG_07196 Colletotrichum graminicola GLRG_07196 N 0.000
HCAG_00961 Histoplasma capsulatum HCAG_00961 N 0.000
MGG_08807 Magnaporthe oryzae MGG_08807 N 0.000
NCU06318 Neurospora crassa NCU06318 N 0.000
PABG_04784 Paracoccidioides brasiliensis PABG_04784 N 0.000
Pa_6_9920 Podospora anserina Pa_6_9920 N 0.000
Pc21g10420 Penicillium chrysogenum Pc21g10420 N 0.000
SS1G_13866 Sclerotinia sclerotiorum SS1G_13866 N 0.000