Aqu1.223751 (Amphimedon queenslandica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Aqu1.223751 T49016_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
U2AF2
M077_0.6 		Homo sapiens UUUUUYC RNAcompete
Ray et al.(2013)
RNCMPT00079 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.223751 RRM 206 280
Aqu1.223751 RRM 315 385
Aqu1.223751 RRM 449 512

Links

Other RRM family RBPs
Other Amphimedon queenslandica RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm5234 Apis mellifera amel4_ncbi_hmm5234 I 0.000
U2af2 Dipodomys ordii ENSDORG00000003250 I 0.000
U2AF2 Felis catus ENSFCAG00000011504 I 0.000
U2AF2 Pan troglodytes ENSPTRG00000011523 I 0.000
nasonia_NCBI_hmm415104 Nasonia vitripennis nasonia_NCBI_hmm415104 I 0.000