Aqu1.223751 (Amphimedon queenslandica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Aqu1.223751 T49016_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
U2AF2
M077_0.6 		Homo sapiens UUUUUYC RNAcompete
Ray et al.(2013)
RNCMPT00079 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.223751 RRM 206 280
Aqu1.223751 RRM 315 385
Aqu1.223751 RRM 449 512

Links

Other RRM family RBPs
Other Amphimedon queenslandica RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSMMUG00000004810 Macaca mulatta ENSMMUG00000004810 I 0.705
ENSLAFG00000018056 Loxodonta africana ENSLAFG00000018056 I 0.705
U2af2 Mus musculus ENSMUSG00000030435 I 0.705
LOC690372 Rattus norvegicus ENSRNOG00000015914 I 0.705
U2AF2 Tursiops truncatus ENSTTRG00000000987 I 0.705
ENSTRUG00000006885 Takifugu rubripes ENSTRUG00000006885 I 0.705
Ame_R015025 Ailuropoda melanoleuca Ame_R015025 I 0.705
ENSGACG00000014500 Gasterosteus aculeatus ENSGACG00000014500 I 0.705
U2AF2 Homo sapiens ENSG00000063244 D 0.705
U2AF2 Anolis carolinensis ENSACAG00000015489 I 0.705
U2AF2 Cavia porcellus ENSCPOG00000001582 I 0.705
LOC100050729 Equus caballus ENSECAG00000010110 I 0.705
AAH44032 Xenopus laevis AAH44032 I 0.700
u2af2 Xenopus tropicalis ENSXETG00000019128 I 0.700
Q24JZ8_BOVIN Bos taurus ENSBTAG00000002830 I 0.700
U2AF2 Canis familiaris ENSCAFG00000002551 I 0.700
ENSTNIG00000011257 Tetraodon nigroviridis ENSTNIG00000011257 I 0.700