U2af2 (Dipodomys ordii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDORG00000003250 T36428_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
U2AF2
M077_0.6 		Homo sapiens UUUUUYC RNAcompete
Ray et al.(2013)
RNCMPT00079 		0.856
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000003041 RRM 181 225
ENSDORP00000003041 RRM 261 331
ENSDORP00000003041 RRM 399 460

Links

Other RRM family RBPs
Other Dipodomys ordii RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
U2AF2 Pan troglodytes ENSPTRG00000011523 I 1.000
U2AF2 Felis catus ENSFCAG00000011504 I 0.938
U2af2 Mus musculus ENSMUSG00000030435 I 0.856
LOC690372 Rattus norvegicus ENSRNOG00000015914 I 0.856
Ame_R015025 Ailuropoda melanoleuca Ame_R015025 I 0.856
U2AF2 Tursiops truncatus ENSTTRG00000000987 I 0.856
ENSLAFG00000018056 Loxodonta africana ENSLAFG00000018056 I 0.856
U2AF2 Homo sapiens ENSG00000063244 D 0.856
LOC100050729 Equus caballus ENSECAG00000010110 I 0.856
U2AF2 Cavia porcellus ENSCPOG00000001582 I 0.856
ENSMMUG00000004810 Macaca mulatta ENSMMUG00000004810 I 0.856
Q24JZ8_BOVIN Bos taurus ENSBTAG00000002830 I 0.851
U2AF2 Canis familiaris ENSCAFG00000002551 I 0.851
U2AF2 Anolis carolinensis ENSACAG00000015489 I 0.851
U2AF2 Pteropus vampyrus ENSPVAG00000004540 I 0.846
AAH44032 Xenopus laevis AAH44032 I 0.846
u2af2 Xenopus tropicalis ENSXETG00000019128 I 0.846
U2AF2 Tetraodon nigroviridis ENSTNIG00000008106 I 0.817
U2AF2 Gasterosteus aculeatus ENSGACG00000010632 I 0.817
U2AF2 Takifugu rubripes ENSTRUG00000005514 I 0.812
U2AF2 Oryzias latipes ENSORLG00000011545 I 0.812
u2af2a Danio rerio ENSDARG00000012505 I 0.808
U2AF2 Tarsius syrichta ENSTSYG00000007432 N 0.798
ENSPPYG00000010429 Pongo pygmaeus ENSPPYG00000010429 N 0.798
u2af2b Danio rerio ENSDARG00000011740 I 0.793
ENSPCAG00000014399 Procavia capensis ENSPCAG00000014399 N 0.775
ENSTRUG00000006885 Takifugu rubripes ENSTRUG00000006885 I 0.769
ENSGACG00000014500 Gasterosteus aculeatus ENSGACG00000014500 I 0.762
ENSTNIG00000011257 Tetraodon nigroviridis ENSTNIG00000011257 I 0.752
SNAP_00000255 Daphnia pulex SNAP_00000255 N 0.749
Minc05905 Meloidogyne incognita Minc05905 N 0.725
Minc05098 Meloidogyne incognita Minc05098 N 0.725
estExt_Genewise1.C_sca_340148 Lottia gigantea estExt_Genewise1.C_sca_340148 I 0.712
XM_001119590.1 Macaca mulatta ENSMMUG00000019197 I 0.712
LOC100400743 Callithrix jacchus ENSCJAG00000017128 I 0.707
BGIBMGA007082 Bombyx mori BGIBMGA007082 I 0.702