estExt_fgenesh1_pg.C_chr_8.10049 (Pichia stipitis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_chr_8.10049 T50671_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_chr_8.10049 RRM 162 230
estExt_fgenesh1_pg.C_chr_8.10049 RRM 246 315

Links

Other RRM family RBPs
Other Pichia stipitis RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A7TSG2_VANPO Vanderwaltozyma polyspora A7TSG2_VANPO I 0.734
ADL160W Ashbya gossypii ADL160W I 0.712
Cd36_85120 Candida dubliniensis Cd36_85120 N 0.763
CLUG_04544 Candida lusitaniae CLUG_04544 N 0.849
CPAG_05112 Candida parapsilosis CPAG_05112 N 0.849
CTRG_02523 Candida tropicalis CTRG_02523 N 0.784
DEHA0F18139g Debaryomyces hansenii DEHA0F18139g N 0.892
KLLA0C12925g Kluyveromyces lactis KLLA0C12925g I 0.734
KLTH0F18766g Kluyveromyces thermotolerans KLTH0F18766g I 0.719
Kwal_21960 Kluyveromyces waltii Kwal_21960 I 0.719
LELG_02873 Lodderomyces elongisporus LELG_02873 N 0.835
orf19.5989 Candida albicans orf19.5989 N 0.763
PGUG_04213 Candida guilliermondii PGUG_04213 N 0.885
SAKL0C12672g Lachancea kluyveri SAKL0C12672g I 0.719
Scas_Contig635.7 Saccharomyces castellii Scas_Contig635.7 I 0.712
XP_002490478.1 Pichia pastoris XP_002490478.1 N 0.705
ZYRO0C02574g Zygosaccharomyces rouxii ZYRO0C02574g I 0.712