A7TSG2_VANPO (Vanderwaltozyma polyspora)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 A7TSG2_VANPO T55365_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HRP1
M030_0.6 		Saccharomyces cerevisiae UAYRUAV RNAcompete
Ray et al.(2013)
RNCMPT00031 		0.801
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
A7TSG2 RRM 158 226
A7TSG2 RRM 242 311

Links

Other RRM family RBPs
Other Vanderwaltozyma polyspora RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Scas_Contig635.7 Saccharomyces castellii Scas_Contig635.7 I 0.899
ZYRO0C02574g Zygosaccharomyces rouxii ZYRO0C02574g I 0.899
KLLA0C12925g Kluyveromyces lactis KLLA0C12925g I 0.885
CAGL0E01947g Candida glabrata CAGL0E01947g I 0.878
SAKL0C12672g Lachancea kluyveri SAKL0C12672g I 0.871
Kwal_21960 Kluyveromyces waltii Kwal_21960 I 0.856
KLTH0F18766g Kluyveromyces thermotolerans KLTH0F18766g I 0.856
ADL160W Ashbya gossypii ADL160W I 0.849
19782_YOL123W Saccharomyces mikatae 19782_YOL123W I 0.827
HRP1 Saccharomyces cerevisiae YOL123W D 0.827
22111_YOL123W Saccharomyces bayanus 22111_YOL123W I 0.827
19853_YOL123W Saccharomyces paradoxus 19853_YOL123W I 0.827
CAGL0M03795g Candida glabrata CAGL0M03795g I 0.820
estExt_fgenesh1_pg.C_chr_8.10049 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10049 N 0.734
XP_002490478.1 Pichia pastoris XP_002490478.1 N 0.719
DEHA0F18139g Debaryomyces hansenii DEHA0F18139g N 0.712