CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GRMZM2G019251
(
Zea mays
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
GRMZM2G019251
T54010_0.6
MaizeSequence (2009-Oct-16)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G019251_P02
RRM
86
155
LHISNLDSGVTVEDVQELFSEVGELKRYSMNYDKDGRSKGTAEVVFARKVDALDAIKRYNGVLLDGKPMN
GRMZM2G019251_P03
RRM
86
127
LHISNLDSGVTVEDVQELFSEVGELKRYSMNYDKDGRSKVEC
Links
Other
RRM
family RBPs
Other
Zea mays
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBG02387
Caenorhabditis briggsae
CBG02387
N
0.000
CBN01162
Caenorhabditis brenneri
CBN01162
N
0.000
CJA05884
Caenorhabditis japonica
CJA05884
N
0.000
CRE11770
Caenorhabditis remanei
CRE11770
N
0.000
EEED8
Caenorhabditis elegans
EEED8
N
0.000