CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CBN01162
(
Caenorhabditis brenneri
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
CBN01162
T60214_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN01162
S1
232
306
AAEVGKIYDGRVNSIQSFGAFITLDGFRQKQEGLCHISQLCKERVQAVADVLKRGQNVKVKVQKIENGKMSLTMK
Links
Other
S1
family RBPs
Other
Caenorhabditis brenneri
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBN12329
Caenorhabditis brenneri
CBN12329
N
1.000
CBG02387
Caenorhabditis briggsae
CBG02387
N
0.853
CRE11770
Caenorhabditis remanei
CRE11770
N
0.853
EEED8
Caenorhabditis elegans
EEED8
N
0.840
CJA05884
Caenorhabditis japonica
CJA05884
N
0.787