CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CJA05884
(
Caenorhabditis japonica
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
CJA05884
T60224_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA05884
S1
241
314
AEIGKIYDGRVQSIQSFGAFVSLEGFRQKQEGLVHISQIKNERVQTVADVLKRGEKVKVKVNKIEMGKISLTMK
Links
Other
S1
family RBPs
Other
Caenorhabditis japonica
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EEED8
Caenorhabditis elegans
EEED8
N
0.905
CBG02387
Caenorhabditis briggsae
CBG02387
N
0.865
CRE11770
Caenorhabditis remanei
CRE11770
N
0.851
CBN12329
Caenorhabditis brenneri
CBN12329
N
0.787
CBN01162
Caenorhabditis brenneri
CBN01162
N
0.787