Sjc_0053490 (Schistosoma japonicum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sjc_0053490 T54817_0.6 SDSPB (2008-Sep-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPN1
M148_0.6 		Homo sapiens ARAAGA RNAcompete
Ray et al.(2013)
RNCMPT00157 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000005044 RRM 97 166

Links

Other RRM family RBPs
Other Schistosoma japonicum RBPs

63 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG23235 Caenorhabditis briggsae CBG23235 N 0.000
CBN02327 Caenorhabditis brenneri CBN02327 N 0.000
CJA08180 Caenorhabditis japonica CJA08180 N 0.000
CRE11175 Caenorhabditis remanei CRE11175 N 0.000
zfp36l2 Danio rerio ENSDARG00000021806 I 0.000
ENSORLG00000008378 Oryzias latipes ENSORLG00000008378 I 0.000
ZFP36L2 Tetraodon nigroviridis ENSTNIG00000017103 I 0.000
ZFP36L2 Takifugu rubripes ENSTRUG00000006923 I 0.000
e_gw1.40.110.1 Trichoplax adhaerens e_gw1.40.110.1 I 0.000
ccch-1 Caenorhabditis elegans F38B7.1 N 0.000
gw1.534.24.1 Capitella teleta gw1.534.24.1 I 0.000
Minc02085 Meloidogyne incognita Minc02085 N 0.000