ccch-1 (Caenorhabditis elegans)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 F38B7.1 T03659_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
F38B7.1a CCCH ZF 199 225
F38B7.1a CCCH ZF 237 263
F38B7.1b CCCH ZF 158 184
F38B7.1b CCCH ZF 196 222

Links

Other CCCH ZF family RBPs
Other Caenorhabditis elegans RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CRE11175 Caenorhabditis remanei CRE11175 N 1.000
CBN02327 Caenorhabditis brenneri CBN02327 N 1.000
CBG23235 Caenorhabditis briggsae CBG23235 N 1.000
CJA08180 Caenorhabditis japonica CJA08180 N 0.981
Minc02085 Meloidogyne incognita Minc02085 N 0.870
Minc01603 Meloidogyne incognita Minc01603 N 0.870
ZFP36 Danio rerio ENSDARG00000044395 I 0.722
PTSG_01604 Salpingoeca rosetta PTSG_01604 N 0.704
gw1.534.24.1 Capitella teleta gw1.534.24.1 I 0.704