CJA08180 (Caenorhabditis japonica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 CJA08180 T02159_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CJA08180 CCCH ZF 28 54
CJA08180 CCCH ZF 66 92

Links

Other CCCH ZF family RBPs
Other Caenorhabditis japonica RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CRE11175 Caenorhabditis remanei CRE11175 N 0.981
ccch-1 Caenorhabditis elegans F38B7.1 N 0.981
CBN02327 Caenorhabditis brenneri CBN02327 N 0.981
CBG23235 Caenorhabditis briggsae CBG23235 N 0.981
Minc01603 Meloidogyne incognita Minc01603 N 0.889
Minc02085 Meloidogyne incognita Minc02085 N 0.889
ZFP36 Danio rerio ENSDARG00000044395 I 0.704