CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MDP0000269989
(
Malus x domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MDP0000269989
T57539_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000269989
RRM
714
779
LYVGGIDARISEQDLRDHFYAHGEIESIRMVLQKACAFVTYTTREGAEKAAEELYSKLVVKGLRLK
Links
Other
RRM
family RBPs
Other
Malus x domestica
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Mkrn1
Drosophila melanogaster
FBgn0029152
N
0.000
GF10705
Drosophila ananassae
FBgn0087746
N
0.000
GG13225
Drosophila erecta
FBgn0105497
N
0.000
GD12110
Drosophila simulans
FBgn0183847
N
0.000
GK20382
Drosophila willistoni
FBgn0222379
N
0.000
GE22322
Drosophila yakuba
FBgn0239546
N
0.000