CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
GF10705
(
Drosophila ananassae
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
FBgn0087746
T03693_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0113897
CCCH ZF
20
44
SQTICRYYVRGICRFGELCRFSHDL
FBpp0113897
CCCH ZF
310
336
GAKDCKYFQKGEGKCPFGNKCFYKHAL
Links
Other
CCCH ZF
family RBPs
Other
Drosophila ananassae
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Mkrn1
Drosophila melanogaster
FBgn0029152
N
0.981
GE22322
Drosophila yakuba
FBgn0239546
N
0.981
GD12110
Drosophila simulans
FBgn0183847
N
0.981
GM22131
Drosophila sechellia
FBgn0177002
N
0.981
GG13225
Drosophila erecta
FBgn0105497
N
0.981
GK20382
Drosophila willistoni
FBgn0222379
N
0.962