XP_002159261.1 (Hydra magnipapillata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 XP_002159261.1 T59051_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CPEB4
M149_0.6 		Homo sapiens UUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00158 		0.836
CPEB2
M012_0.6 		Homo sapiens CHUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00012 		0.793
orb2
M120_0.6 		Drosophila melanogaster KUUUKKK RNAcompete
Ray et al.(2013)
RNCMPT00126 		0.779
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
XP_002159261.1 RRM 386 450
XP_002159261.1 RRM 494 563

Links

Other RRM family RBPs
Other Hydra magnipapillata RBPs

147 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAF69826 Xenopus laevis AAF69826 N 0.000
AAH84957 Xenopus laevis AAH84957 N 0.000
AAI70337 Xenopus laevis AAI70337 N 0.000
Ame_R016146 Ailuropoda melanoleuca Ame_R016146 N 0.000
BICC1 Anolis carolinensis ENSACAG00000001892 N 0.000
BICC1 Bos taurus ENSBTAG00000010694 N 0.000
BICC1 Canis familiaris ENSCAFG00000012331 N 0.000
BICC1 Choloepus hoffmanni ENSCHOG00000010828 N 0.000
BICC1 Callithrix jacchus ENSCJAG00000010639 N 0.000
BICC1 Cavia porcellus ENSCPOG00000015585 N 0.000
BICC1 Equus caballus ENSECAG00000013979 N 0.000
BICC1 Echinops telfairi ENSETEG00000010754 N 0.000
BICC1 Homo sapiens ENSG00000122870 N 0.000
BICC1 Gallus gallus ENSGALG00000001847 N 0.000
BICC1 Gorilla gorilla ENSGGOG00000005484 N 0.000
BICC1 Loxodonta africana ENSLAFG00000007749 N 0.000
BICC1 Microcebus murinus ENSMICG00000002045 N 0.000
BICC1 Macaca mulatta ENSMMUG00000015750 N 0.000
Bicc1 Mus musculus ENSMUSG00000014329 N 0.000
BICC1 Ornithorhynchus anatinus ENSOANG00000013223 N 0.000
BICC1 Oryctolagus cuniculus ENSOCUG00000013696 N 0.000
BICC1 Pan troglodytes ENSPTRG00000002520 N 0.000
BICC1 Pteropus vampyrus ENSPVAG00000008004 N 0.000
Bicc1 Rattus norvegicus ENSRNOG00000000614 N 0.000
BICC1 Sus scrofa ENSSSCG00000010204 N 0.000
BICC1 Taeniopygia guttata ENSTGUG00000005584 N 0.000
BICC1 Tarsius syrichta ENSTSYG00000004527 N 0.000
BICC1 Tursiops truncatus ENSTTRG00000017309 N 0.000
Q5U4T7 Xenopus laevis Q5U4T7 N 0.000
Q9IA00 Xenopus laevis Q9IA00 N 0.000