CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAI10935
(
Xenopus laevis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAI10935
T59617_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI10935
RRM
8
78
IQVTNVSPSASSEQMITLFGFLGKIEELRLFPPDDSPLPVTSRVCFVKFQDPDSAVVSQHLTNTVFVDRAL
Links
Other
RRM
family RBPs
Other
Xenopus laevis
RBPs
42 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Bm1_09760
Brugia malayi
Bm1_09760
N
0.000
CBN25972
Caenorhabditis brenneri
CBN25972
N
0.000
CRE16190
Caenorhabditis remanei
CRE16190
N
0.000
ENSLAFG00000028496
Loxodonta africana
ENSLAFG00000028496
N
0.000
ENSPCAG00000003709
Procavia capensis
ENSPCAG00000003709
N
0.000
estExt_fgenesh2_pm.C_220017
Branchiostoma floridae
estExt_fgenesh2_pm.C_220017
N
0.000
e_gw1.2.1173.1
Trichoplax adhaerens
e_gw1.2.1173.1
N
0.000
Minc05098
Meloidogyne incognita
Minc05098
N
0.000
Ppa-uaf-1
Pristionchus pacificus
PPA25373
N
0.000
WUBG_04401
Wuchereria bancrofti
WUBG_04401
N
0.000
XP_001189425.1
Strongylocentrotus purpuratus
XP_001189425.1
N
0.000
XP_792919.2
Strongylocentrotus purpuratus
XP_792919.2
N
0.000
uaf-1
Caenorhabditis elegans
Y92C3B.2
N
0.000