CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SRSF11
(
Cavia porcellus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCPOG00000009554
T35817_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000008576
RRM
1
64
SASSEQMRTLFGFLGKIDELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALI
Links
Other
RRM
family RBPs
Other
Cavia porcellus
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSOCUG00000025440
Oryctolagus cuniculus
ENSOCUG00000025440
N
0.889
ENSOCUG00000024114
Oryctolagus cuniculus
ENSOCUG00000024114
N
0.889
ENSOCUG00000002001
Oryctolagus cuniculus
ENSOCUG00000002001
N
0.889
SRSF11
Ornithorhynchus anatinus
ENSOANG00000015528
N
0.889
SRSF11
Procavia capensis
ENSPCAG00000012684
N
0.889
SRSF11
Tursiops truncatus
ENSTTRG00000015054
N
0.889
D3ZDC8_RAT
Rattus norvegicus
ENSRNOG00000029592
N
0.889
SRSF11
Pteropus vampyrus
ENSPVAG00000011918
N
0.889
SRSF11
Pan troglodytes
ENSPTRG00000000852
N
0.889
Srsf11
Mus musculus
ENSMUSG00000055436
N
0.889
SFRS11
Macaca mulatta
ENSMMUG00000013852
N
0.889
Q148M1_BOVIN
Bos taurus
ENSBTAG00000015474
N
0.889
SRSF11
Homo sapiens
ENSG00000116754
N
0.889
LOC100400412
Callithrix jacchus
ENSCJAG00000017704
N
0.889
Srsf11
Dipodomys ordii
ENSDORG00000000669
N
0.889
SRSF11
Gorilla gorilla
ENSGGOG00000005774
N
0.889
SRSF11
Loxodonta africana
ENSLAFG00000015882
N
0.889
SRSF11
Sus scrofa
ENSSSCG00000003791
N
0.889
SRSF11
Myotis lucifugus
ENSMLUG00000006203
N
0.889
SRSF11
Microcebus murinus
ENSMICG00000005537
N
0.889
Ame_R020987
Ailuropoda melanoleuca
Ame_R020987
N
0.889
SRSF11
Monodelphis domestica
ENSMODG00000000559
N
0.887
ENSPPYG00000001245
Pongo pygmaeus
ENSPPYG00000001245
N
0.875
SRSF11
Sorex araneus
ENSSARG00000005811
N
0.875
SRSF11
Macropus eugenii
ENSMEUG00000000319
N
0.875
SRSF11
Erinaceus europaeus
ENSEEUG00000002456
N
0.861
SRSF11
Tupaia belangeri
ENSTBEG00000004406
N
0.853
Q5ZJ42_CHICK
Gallus gallus
ENSGALG00000011305
N
0.847
SRSF11
Anolis carolinensis
ENSACAG00000013654
N
0.833
AAH72078
Xenopus laevis
AAH72078
N
0.833
srsf11
Xenopus tropicalis
ENSXETG00000012371
N
0.833
AAI10935
Xenopus laevis
AAI10935
N
0.806
ENSCJAG00000009424
Callithrix jacchus
ENSCJAG00000009424
N
0.736
srsf11
Danio rerio
ENSDARG00000004342
N
0.722
SRSF11
Takifugu rubripes
ENSTRUG00000009316
N
0.722
SRSF11
Tetraodon nigroviridis
ENSTNIG00000008514
N
0.708
SRSF11
Takifugu rubripes
ENSTRUG00000017369
N
0.708
SRSF11
Tetraodon nigroviridis
ENSTNIG00000010494
N
0.708